| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
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The map label for this gene is hcp
Identifier: 161486851
GI number: 161486851
Start: 404604
End: 406310
Strand: Direct
Name: hcp
Synonym: CTC00410
Alternate gene names: 161486851
Gene position: 404604-406310 (Clockwise)
Preceding gene: 28210162
Following gene: 28210164
Centisome position: 14.45
GC content: 32.04
Gene sequence:
>1707_bases ATGTTTTGTTATCAATGCCAAGAAGCAGCAGGATGTAAAGGCTGTACAGTAAGAGGAGTATGTGGAAAGACAGAAGATGT AGCAAAATCACAAGATTTATTAATATATATATTAAAAGGAATTTCAGTATATGGAGTAAAAGGAAGAGAAGTTGGAGTTA TCAACAAAGAAGTGGATAACTTTATGGTAGAGGGTCTATTTGCTACTATAACAAACGCTAACTTTGACAGAGAAGTATTT ATAGAAAGAATTAAAAGAGGATTACAATTAAGACAAGAATTAAAAGAACAAGTTATAAAAGCAGGAGGAAATGTAGAAAA TTCTCATGCAAATAAAAACTGGTTAGATAAAATGTTATCTTTTGTTGGATTGAAAAAAGAAGAAGAAACTAAACTTCCAG ATGCAGCCACATGGTTCGCTGATAATGTAGAAGAATTTAATGCTAAGGCTGAAAAAGTAGGAGTATTAGCAACAAAAGAT GAAGACATAAGATCTTTAAGAGAACTTATAACTTATGGAATAAAAGGACTAGCAGCTTATGTAGAGCACGCTCATAATTT AAATTTCGATAATGAAGAAATACATGGATTTATGCATAAAGCATTAGCTGCAACTTTAGATGATACATTAACAGTAGATG ATTTAGTAGCTTTAACTTTAGAAACAGGTAAATATGGTGTAGAAGGAATGGCATTACTTGATAAAGCTAATACACAAACT TATGGAAATCCAGAAATAACTAAAGTTAATATAGGAGTTAGAAATAATCCAGGTATATTAATAAGTGGACATGATCTAAG AGATTTAGAACAACTATTAGAACAAACAAAAGGAACAGGAGTAGATGTTTATACTCATAGTGAAATGTTACCAGCACATT ACTATCCAGCATTTAAAAAGTATTCACACTTTGCAGGAAACTATGGAAATGCTTGGTGGAAACAAACAGAAGAATTCGAG AAATTTAATGGACCAATCCTTATGACAACAAACTGTTTAGTACCGCCAAAGGATTCATATAAAGATAGAGTTTATACTAC AGGGGTAGTTGGGTTCCCAGGACTAAAGCATATAGATGCTGATGAAAAGGGAGAAAAAGACTTCTCAAGCATAATTGAAC ATGCCAAAAAATGTGCAGCACCAACAGAAATTGAAAAAGGAGAAATAGTAGGTGGATTTGCACATAACCAAGTATTCCAA TTAGCAGACAAAGTAGTAGAAGCAGTAAAAACTGGAGCAATAAAGAGATTCTTTGTTATGGCTGGTTGTGACGGAAGAGC TAAATCAAGAAACTACTATACAGAATTTGCTCAAAAGCTTCCAAAGGATACAGTAATATTAACAGCAGGTTGTGCTAAAT ACAAATATAATAAATTGAACTTAGGAGATATTGGAGGAATTCCAAGAGTGCTAGATGCAGGACAATGTAACGATTCTTAT TCATTAGCACTAATAGCATTAAAATTAAAAGAAGTATTTGAATTAGAAGATATAAATGAATTACCAATATCCTATAATAT AGCTTGGTATGAGCAAAAAGCTGTAATAGTATTACTTGCATTATTACACTTAGGAGTAAAAAATATTCACCTAGGACCAA CATTACCAGCATTCCTATCCCCAAATGTAGCTAATGTTTTAGTAGAAAACTTTGGAATAGGTGGAATAACAAACGTAGAA GATGACATGAAAATGTTCTTAGGATAA
Upstream 100 bases:
>100_bases CATTTGTTACCGATTAAATTAGATTAAATTAGTATAATTTAAAACATAGAAGAGAGAAAATAAAATTAATTTTATATATA AGGAGGAAAAAATAATGAGT
Downstream 100 bases:
>100_bases TTTATATATAATTTAAAAGCAGACTATTTTATAACTTTTTATAAAATAGTTTGCTTTTTCTTGCTTTTAATTAAAATGAA CTTATTTGCTTAAATACTGT
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MFCYQCQEAAGCKGCTVRGVCGKTEDVAKSQDLLIYILKGISVYGVKGREVGVINKEVDNFMVEGLFATITNANFDREVF IERIKRGLQLRQELKEQVIKAGGNVENSHANKNWLDKMLSFVGLKKEEETKLPDAATWFADNVEEFNAKAEKVGVLATKD EDIRSLRELITYGIKGLAAYVEHAHNLNFDNEEIHGFMHKALAATLDDTLTVDDLVALTLETGKYGVEGMALLDKANTQT YGNPEITKVNIGVRNNPGILISGHDLRDLEQLLEQTKGTGVDVYTHSEMLPAHYYPAFKKYSHFAGNYGNAWWKQTEEFE KFNGPILMTTNCLVPPKDSYKDRVYTTGVVGFPGLKHIDADEKGEKDFSSIIEHAKKCAAPTEIEKGEIVGGFAHNQVFQ LADKVVEAVKTGAIKRFFVMAGCDGRAKSRNYYTEFAQKLPKDTVILTAGCAKYKYNKLNLGDIGGIPRVLDAGQCNDSY SLALIALKLKEVFELEDINELPISYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLSPNVANVLVENFGIGGITNVE DDMKMFLG
Sequences:
>Translated_568_residues MFCYQCQEAAGCKGCTVRGVCGKTEDVAKSQDLLIYILKGISVYGVKGREVGVINKEVDNFMVEGLFATITNANFDREVF IERIKRGLQLRQELKEQVIKAGGNVENSHANKNWLDKMLSFVGLKKEEETKLPDAATWFADNVEEFNAKAEKVGVLATKD EDIRSLRELITYGIKGLAAYVEHAHNLNFDNEEIHGFMHKALAATLDDTLTVDDLVALTLETGKYGVEGMALLDKANTQT YGNPEITKVNIGVRNNPGILISGHDLRDLEQLLEQTKGTGVDVYTHSEMLPAHYYPAFKKYSHFAGNYGNAWWKQTEEFE KFNGPILMTTNCLVPPKDSYKDRVYTTGVVGFPGLKHIDADEKGEKDFSSIIEHAKKCAAPTEIEKGEIVGGFAHNQVFQ LADKVVEAVKTGAIKRFFVMAGCDGRAKSRNYYTEFAQKLPKDTVILTAGCAKYKYNKLNLGDIGGIPRVLDAGQCNDSY SLALIALKLKEVFELEDINELPISYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLSPNVANVLVENFGIGGITNVE DDMKMFLG >Mature_568_residues MFCYQCQEAAGCKGCTVRGVCGKTEDVAKSQDLLIYILKGISVYGVKGREVGVINKEVDNFMVEGLFATITNANFDREVF IERIKRGLQLRQELKEQVIKAGGNVENSHANKNWLDKMLSFVGLKKEEETKLPDAATWFADNVEEFNAKAEKVGVLATKD EDIRSLRELITYGIKGLAAYVEHAHNLNFDNEEIHGFMHKALAATLDDTLTVDDLVALTLETGKYGVEGMALLDKANTQT YGNPEITKVNIGVRNNPGILISGHDLRDLEQLLEQTKGTGVDVYTHSEMLPAHYYPAFKKYSHFAGNYGNAWWKQTEEFE KFNGPILMTTNCLVPPKDSYKDRVYTTGVVGFPGLKHIDADEKGEKDFSSIIEHAKKCAAPTEIEKGEIVGGFAHNQVFQ LADKVVEAVKTGAIKRFFVMAGCDGRAKSRNYYTEFAQKLPKDTVILTAGCAKYKYNKLNLGDIGGIPRVLDAGQCNDSY SLALIALKLKEVFELEDINELPISYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLSPNVANVLVENFGIGGITNVE DDMKMFLG
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family
Homologues:
Organism=Escherichia coli, GI87081794, Length=574, Percent_Identity=41.4634146341463, Blast_Score=457, Evalue=1e-129,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HCP_CLOTE (Q898N5)
Other databases:
- EMBL: AE015927 - RefSeq: NP_781107.2 - ProteinModelPortal: Q898N5 - SMR: Q898N5 - GeneID: 1060009 - GenomeReviews: AE015927_GR - KEGG: ctc:CTC00410 - NMPDR: fig|212717.1.peg.329 - HOGENOM: HBG294215 - OMA: ISERNIA - PhylomeDB: Q898N5 - ProtClustDB: PRK05290 - BioCyc: CTET212717:CTC_00410-MONOMER - GO: GO:0005737 - HAMAP: MF_00069 - InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 - Gene3D: G3DSA:3.40.50.2030 - Gene3D: G3DSA:1.20.1270.20 - PIRSF: PIRSF000076 - TIGRFAMs: TIGR01703
Pfam domain/function: PF03063 Prismane; SSF56821 Prismane_like
EC number: NA
Molecular weight: Translated: 62945; Mature: 62945
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCYQCQEAAGCKGCTVRGVCGKTEDVAKSQDLLIYILKGISVYGVKGREVGVINKEVDN CCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCHHEEEECCCEEEECCCCEEEEHHHHHHH FMVEGLFATITNANFDREVFIERIKRGLQLRQELKEQVIKAGGNVENSHANKNWLDKMLS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH FVGLKKEEETKLPDAATWFADNVEEFNAKAEKVGVLATKDEDIRSLRELITYGIKGLAAY HHCCCCHHHCCCCCHHHHHHCCHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHH VEHAHNLNFDNEEIHGFMHKALAATLDDTLTVDDLVALTLETGKYGVEGMALLDKANTQT HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCCEEEEECCCCCC YGNPEITKVNIGVRNNPGILISGHDLRDLEQLLEQTKGTGVDVYTHSEMLPAHYYPAFKK CCCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH YSHFAGNYGNAWWKQTEEFEKFNGPILMTTNCLVPPKDSYKDRVYTTGVVGFPGLKHIDA HHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCC DEKGEKDFSSIIEHAKKCAAPTEIEKGEIVGGFAHNQVFQLADKVVEAVKTGAIKRFFVM CCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEE AGCDGRAKSRNYYTEFAQKLPKDTVILTAGCAKYKYNKLNLGDIGGIPRVLDAGQCNDSY ECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHCCCCCCCCC SLALIALKLKEVFELEDINELPISYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLS CHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEECCCCCHHHHC PNVANVLVENFGIGGITNVEDDMKMFLG CCHHHHHHHHCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MFCYQCQEAAGCKGCTVRGVCGKTEDVAKSQDLLIYILKGISVYGVKGREVGVINKEVDN CCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCHHEEEECCCEEEECCCCEEEEHHHHHHH FMVEGLFATITNANFDREVFIERIKRGLQLRQELKEQVIKAGGNVENSHANKNWLDKMLS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH FVGLKKEEETKLPDAATWFADNVEEFNAKAEKVGVLATKDEDIRSLRELITYGIKGLAAY HHCCCCHHHCCCCCHHHHHHCCHHHHCCHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHH VEHAHNLNFDNEEIHGFMHKALAATLDDTLTVDDLVALTLETGKYGVEGMALLDKANTQT HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEECCCCCCCCEEEEECCCCCC YGNPEITKVNIGVRNNPGILISGHDLRDLEQLLEQTKGTGVDVYTHSEMLPAHYYPAFKK CCCCCEEEEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH YSHFAGNYGNAWWKQTEEFEKFNGPILMTTNCLVPPKDSYKDRVYTTGVVGFPGLKHIDA HHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCC DEKGEKDFSSIIEHAKKCAAPTEIEKGEIVGGFAHNQVFQLADKVVEAVKTGAIKRFFVM CCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEE AGCDGRAKSRNYYTEFAQKLPKDTVILTAGCAKYKYNKLNLGDIGGIPRVLDAGQCNDSY ECCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHCCCCCCCCC SLALIALKLKEVFELEDINELPISYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLS CHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHHHHHCCCCEEECCCCCHHHHC PNVANVLVENFGIGGITNVEDDMKMFLG CCHHHHHHHHCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12552129