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The map label for this gene is yicC [H]

Identifier: 161486844

GI number: 161486844

Start: 1301584

End: 1302462

Strand: Direct

Name: yicC [H]

Synonym: CTC01215

Alternate gene names: 161486844

Gene position: 1301584-1302462 (Clockwise)

Preceding gene: 28210901

Following gene: 28210904

Centisome position: 46.5

GC content: 27.42

Gene sequence:

>879_bases
ATGGTAAAAAGTATGACGGGCTTTGGAAGGGCAACATTTGAAAATGAAAAAAGAAGTTTTGTAGTTGAAATTAAAAGTGT
AAATCACAGATATTGTGACATAAACATAAAAATGCCCAGAAGCTTAATCCAGCTAGAACAAAAGATAAGAGCAATAATAC
AAAAATATGTAGGTAGAGGAAAAATAGACGTATTTATAAATCTTAATACATATGATAAGAGTAATGTGGAAACAATTTTT
AATAAGGATTTAGCAGATGGATATGTAAAAAATCTAGAAGAAATAAAAAATAGATATGGTATATCAGAAGAAATTTCTAT
AGATTTAATTGCTAGATTTCCCGAGGTCATCACCATAGAACATAAAGAGCAAAATATTGATGAACTTTGGATGGAACTTT
GCACTCCTTTAGAGGAAGGGGTTGTTTCTCTTGTAAAAATGAGAGAAATAGAAGGTTCTAAACTTAAAGAAAATATTTTA
GAAAAATGTGAAACCATTAAAGAAATATGTAAAGAAGTCGAAATTATAGCTCCTAAGGTAGTAAAAATACACAAAGAAAA
ATTAAATTTAAGATTAGAAGAACTTTTAAAAGATGTTGAAATAGATGAAGAAAGATTATCTATGGAGGTGGCATTATTTG
CAGATAGAAGCTGTATAGATGAAGAAGTAGTTAGACTTAAAAGCCACTTAATTCAAGTGAAAGATACTTTGGAATTAGAG
GAACCCATAGGTAGAAAATTAGATTTTATAGTACAAGAAATGAATAGGGAAGTAAATACAATTGCTTCAAAAGCTAACAA
TTTAGATATTTCAAACTTTGTATTAACAATGAAAAATGAAATTGAAAAAATAAGAGAACAAATTCAAAATATTGAATAA

Upstream 100 bases:

>100_bases
GGAGCATTCTTTAAGTTTTTGCAAAATATGCTTGAATTTTTCATAAAACTAAAGGTATAATGAGTATAGTTAAGCAATTG
TTAATGGAAGGATGAAGTTT

Downstream 100 bases:

>100_bases
TAGGAGGAATTATATGGCTATTAAATTAATAAACATAGGATTTGGAAACATTGTTTCAGCAAATAGACTTATTGCAATAG
TAAGTCCCGAATCAGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MVKSMTGFGRATFENEKRSFVVEIKSVNHRYCDINIKMPRSLIQLEQKIRAIIQKYVGRGKIDVFINLNTYDKSNVETIF
NKDLADGYVKNLEEIKNRYGISEEISIDLIARFPEVITIEHKEQNIDELWMELCTPLEEGVVSLVKMREIEGSKLKENIL
EKCETIKEICKEVEIIAPKVVKIHKEKLNLRLEELLKDVEIDEERLSMEVALFADRSCIDEEVVRLKSHLIQVKDTLELE
EPIGRKLDFIVQEMNREVNTIASKANNLDISNFVLTMKNEIEKIREQIQNIE

Sequences:

>Translated_292_residues
MVKSMTGFGRATFENEKRSFVVEIKSVNHRYCDINIKMPRSLIQLEQKIRAIIQKYVGRGKIDVFINLNTYDKSNVETIF
NKDLADGYVKNLEEIKNRYGISEEISIDLIARFPEVITIEHKEQNIDELWMELCTPLEEGVVSLVKMREIEGSKLKENIL
EKCETIKEICKEVEIIAPKVVKIHKEKLNLRLEELLKDVEIDEERLSMEVALFADRSCIDEEVVRLKSHLIQVKDTLELE
EPIGRKLDFIVQEMNREVNTIASKANNLDISNFVLTMKNEIEKIREQIQNIE
>Mature_292_residues
MVKSMTGFGRATFENEKRSFVVEIKSVNHRYCDINIKMPRSLIQLEQKIRAIIQKYVGRGKIDVFINLNTYDKSNVETIF
NKDLADGYVKNLEEIKNRYGISEEISIDLIARFPEVITIEHKEQNIDELWMELCTPLEEGVVSLVKMREIEGSKLKENIL
EKCETIKEICKEVEIIAPKVVKIHKEKLNLRLEELLKDVEIDEERLSMEVALFADRSCIDEEVVRLKSHLIQVKDTLELE
EPIGRKLDFIVQEMNREVNTIASKANNLDISNFVLTMKNEIEKIREQIQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=292, Percent_Identity=32.1917808219178, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34067; Mature: 34067

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKSMTGFGRATFENEKRSFVVEIKSVNHRYCDINIKMPRSLIQLEQKIRAIIQKYVGRG
CCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
KIDVFINLNTYDKSNVETIFNKDLADGYVKNLEEIKNRYGISEEISIDLIARFPEVITIE
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
HKEQNIDELWMELCTPLEEGVVSLVKMREIEGSKLKENILEKCETIKEICKEVEIIAPKV
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKIHKEKLNLRLEELLKDVEIDEERLSMEVALFADRSCIDEEVVRLKSHLIQVKDTLELE
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
EPIGRKLDFIVQEMNREVNTIASKANNLDISNFVLTMKNEIEKIREQIQNIE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVKSMTGFGRATFENEKRSFVVEIKSVNHRYCDINIKMPRSLIQLEQKIRAIIQKYVGRG
CCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
KIDVFINLNTYDKSNVETIFNKDLADGYVKNLEEIKNRYGISEEISIDLIARFPEVITIE
CEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEE
HKEQNIDELWMELCTPLEEGVVSLVKMREIEGSKLKENILEKCETIKEICKEVEIIAPKV
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKIHKEKLNLRLEELLKDVEIDEERLSMEVALFADRSCIDEEVVRLKSHLIQVKDTLELE
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
EPIGRKLDFIVQEMNREVNTIASKANNLDISNFVLTMKNEIEKIREQIQNIE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]