| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is ppsA [H]
Identifier: 77747646
GI number: 77747646
Start: 640403
End: 642778
Strand: Reverse
Name: ppsA [H]
Synonym: PD0524
Alternate gene names: 77747646
Gene position: 642778-640403 (Counterclockwise)
Preceding gene: 28198438
Following gene: 28198433
Centisome position: 25.51
GC content: 53.66
Gene sequence:
>2376_bases TTGAACGAAAATATCCTTTGGTTACATGAACTGCGCTTGACCGATCTGGCCCGCGTCGGTGGTAAAAATTCCTCACTCGG CGAAATGATCGGCAATCTCACTGCCCTTGGAGTCTCTGTTCCAGGTGGCTATGCCACCACCGCAGCAGCATTTAAAGCCT TTATCGCTTACAACAACCTGTCCAAACGGATCTACGACAAACTAGCCACCCTTGATGTTGAGGACGTCAAAGCACTGACA GCTGCCGGCAAAGAAATCCGCGACTGGGTCATTGACGCTCCATTACAACCAGAACTGGAGAAGGATATTCGTGACGCCTA CGACACGTTGTCAAAAGACAATAGCGGCAACGACGTCGCCGTAGCGGTGCGCTCTTCAGCGACCGCGGAAGATTTACCAG ACGCCTCATTCGCCGGCCAACAGGAAACCTTTCTTAATGTGATCGGCGCCGACCAGGTCGTACACAAAATTAAAGAAGTA TTCGCAAGTCTTTATAACGATCGTGCAATTGCCTACCGCGTCCATCATGGCTTCAAGCACGAGGACGTATTCCTCTCCGC CGGAATACAACTGATGGTTCGCTCGGATATCAGTGCCTCCGGCGTGCTGTTCACTCTAGACACCGAGTCAGGCTTCCGCG AGGTGGTGTTCGTCACCGCCAGCTTCGGCCTTGGTGAAATGGTCGTACAGGGCGCCGTCAACCCAGACGAATTCTATGTC TATAAAAAGACGCTCAAAGCTGGCAAACCTGCCATCCTGCGCCGCACACTCGGCACCAAACTGGTGCGCATGGTCTATTC AGACGCCCCAGGAGAGCGCGTCAAGATCGAAGATACCCCAACTGAATTACGTCACTGCTTCGCCATCAGCGACGCTGACG TACAAGAGCTGGCGAGACAAGCACTGATTATTGAGCAGCACTACGGCCGCCCGATGGACATTGAATGGGCTAAGGATGGG ATCAGCGGCAAATTATTTATTGTGCAGGCACGTCCGGAGACAGTGAAATCACGCAGTCACACCACCCAGATTGAACGCTT TGCACTCCAACAACCCGGCCAGATACTGACAGAGGGACGTGCCATCGGCCAGAAGATCGGCAGCGGCACAGCCCGTGTGG TGAACTCACTTGAGGACATGCACCACATGCAACCCGGCGATGTCCTGGTTGCAGACATGACCGACCCAGACTGGGAGCCA GTCATGAAACGCGCCAGCGCGATTGTCACCAATCGCGGCGGACGTACCTGCCACGCCGCCATTATCGCCCGTGAGCTGGG AGTACCCGCAGTGGTTGGCACCGGCAATGCGCTATCAATCATTCAAGACGGCCAACCCATCACGGTAAGCTGCGCCGAAG GTGACACCGGCTATATCTACGCCGGGAAACTACCGTTCGAACGCACCACAACAGACCTCGGCCACATGCCACCAGCGCCG CTAAAAATCATGATGAATGTTGCCAATCCGGAACGTGCGTTCGACTTTGGGCAACTCCCGAATGCCGGTATCGGCTTGGC ACGCCTGGAAATGATCATCGCCGCACACATCGGCGTGCACCCAAAAGCACTTCTGGAATACCACAAACAAGATGCTGACA CGAAACAGAAGATTGACGCCAAGATTGCCGGTTATCCTGATCCAGTCAGCTTCTACGTCAACCGCCTCGCCGAAGGTATT GCGACCCTGACCGCCTCAGTCGCACCCCATACGGTCATCGTGCGCCTGTCGGACTTCAAATCCAACGAATACGCACACCT GATCGGTGGCCAGCACTATGAGCCACAAGAAGAAAACCCGATGCTCGGCTTCCGCGGTGCCAGCCGTTACGTCGACCCTT CATTCAGCGATGCCTTCGCATTAGAGTGCAAAGCAGTACTAAAAGTCCGTAACGAGATGGGTCTAGATAACCTCTGGGTG ATGATTCCATTTGTACGCACTTTGGAAGAAGGTCGCAAAGTGATCGACGTACTGCGACAAAATGGCTTAAAACAGGGAGA AAATGGTTTAAAAGTGATCATGATGTGCGAAGTGCCCTCCAACGCACTGCTGGCTGATGAATTCCTGGATATCTTCGACG GCTTCTCAATCGGCTCCAACGATCTCACCCAACTTTCCCTAGGTCTGGACCGCGACTCCTCCATCGTCGCCCCTCTATTT GACGAGCGCAATCCAGCCGTCAAAAAACTACTGTCAATGGCAATAAAAGCGGCACGTTCCAAGGGAAAATACATTGGAAT CTGCGGCCAAGGCCCATCCGATCATCCAGACTTGGCCGAATGGCTGATGCAAGAAGGCATAGAATCCCTGTCACTGAACC CAGATACCGTCGTCGATACTTGGCTACGCTTGGCAAAACTAAAAACGGTGCACTAA
Upstream 100 bases:
>100_bases TTGTGCAGTCTTGCCTATGCACTGCATCATACGACCACTTTAATACGGACGCGGCCATACAGCCCTCCTCCAGGCGATGG CCCTAAACGGAGCATCGTAC
Downstream 100 bases:
>100_bases ATGGACTGGACTAAATTACTATCAAACATCGTATCGCCTGCAACAGTGACGACGTTCCACGGCAGATTCAACTGGACACG GATCGACTGGATCCACATCC
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNLSKRIYDKLATLDVEDVKALT AAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQVVHKIKEV FASLYNDRAIAYRVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGAVNPDEFYV YKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQALIIEQHYGRPMDIEWAKDG ISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVADMTDPDWEP VMKRASAIVTNRGGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTDLGHMPPAP LKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDAKIAGYPDPVSFYVNRLAEGI ATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNEMGLDNLWV MIPFVRTLEEGRKVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRDSSIVAPLF DERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDTWLRLAKLKTVH
Sequences:
>Translated_791_residues MNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNLSKRIYDKLATLDVEDVKALT AAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQVVHKIKEV FASLYNDRAIAYRVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGAVNPDEFYV YKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQALIIEQHYGRPMDIEWAKDG ISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVADMTDPDWEP VMKRASAIVTNRGGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTDLGHMPPAP LKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDAKIAGYPDPVSFYVNRLAEGI ATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNEMGLDNLWV MIPFVRTLEEGRKVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRDSSIVAPLF DERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDTWLRLAKLKTVH >Mature_791_residues MNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNLSKRIYDKLATLDVEDVKALT AAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVAVAVRSSATAEDLPDASFAGQQETFLNVIGADQVVHKIKEV FASLYNDRAIAYRVHHGFKHEDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGAVNPDEFYV YKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQALIIEQHYGRPMDIEWAKDG ISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGRAIGQKIGSGTARVVNSLEDMHHMQPGDVLVADMTDPDWEP VMKRASAIVTNRGGRTCHAAIIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTDLGHMPPAP LKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDAKIAGYPDPVSFYVNRLAEGI ATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENPMLGFRGASRYVDPSFSDAFALECKAVLKVRNEMGLDNLWV MIPFVRTLEEGRKVIDVLRQNGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRDSSIVAPLF DERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDTWLRLAKLKTVH
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=786, Percent_Identity=64.1221374045801, Blast_Score=1071, Evalue=0.0, Organism=Escherichia coli, GI1788726, Length=163, Percent_Identity=36.8098159509202, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1788756, Length=396, Percent_Identity=25.7575757575758, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI48994992, Length=162, Percent_Identity=32.7160493827161, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1789193, Length=403, Percent_Identity=23.5732009925558, Blast_Score=86, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17564524, Length=397, Percent_Identity=25.1889168765743, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 86529; Mature: 86529
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNL CCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHCHHEEEEECCCCHHHHHHHHHHHHHHHHH SKRIYDKLATLDVEDVKALTAAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVA HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE VAVRSSATAEDLPDASFAGQQETFLNVIGADQVVHKIKEVFASLYNDRAIAYRVHHGFKH EEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC EDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGAVNPDEFYV CCEEEECCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHCCCCCHHEEE YKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQ EHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHH ALIIEQHYGRPMDIEWAKDGISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGR HHHHHHHCCCCCCCHHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCCCCHHHHHHH AIGQKIGSGTARVVNSLEDMHHMQPGDVLVADMTDPDWEPVMKRASAIVTNRGGRTCHAA HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHH IIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTDLGHMPPAP HHHHHCCCCEEEECCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCHHCCCCCCC LKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDA CEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCH KIAGYPDPVSFYVNRLAEGIATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENP HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCC MLGFRGASRYVDPSFSDAFALECKAVLKVRNEMGLDNLWVMIPFVRTLEEGRKVIDVLRQ CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH NGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRDSSIVAPLF CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEECCCC DERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDT CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCHHHCCCCCHHHHHH WLRLAKLKTVH HHHHHHHHCCC >Mature Secondary Structure MNENILWLHELRLTDLARVGGKNSSLGEMIGNLTALGVSVPGGYATTAAAFKAFIAYNNL CCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHCHHEEEEECCCCHHHHHHHHHHHHHHHHH SKRIYDKLATLDVEDVKALTAAGKEIRDWVIDAPLQPELEKDIRDAYDTLSKDNSGNDVA HHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEE VAVRSSATAEDLPDASFAGQQETFLNVIGADQVVHKIKEVFASLYNDRAIAYRVHHGFKH EEEECCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC EDVFLSAGIQLMVRSDISASGVLFTLDTESGFREVVFVTASFGLGEMVVQGAVNPDEFYV CCEEEECCEEEEEECCCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHCCCCCHHEEE YKKTLKAGKPAILRRTLGTKLVRMVYSDAPGERVKIEDTPTELRHCFAISDADVQELARQ EHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHH ALIIEQHYGRPMDIEWAKDGISGKLFIVQARPETVKSRSHTTQIERFALQQPGQILTEGR HHHHHHHCCCCCCCHHHCCCCCCEEEEEECCCHHHHCCHHHHHHHHHHHCCCCHHHHHHH AIGQKIGSGTARVVNSLEDMHHMQPGDVLVADMTDPDWEPVMKRASAIVTNRGGRTCHAA HHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHH IIARELGVPAVVGTGNALSIIQDGQPITVSCAEGDTGYIYAGKLPFERTTTDLGHMPPAP HHHHHCCCCEEEECCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCCHHCCCCCCC LKIMMNVANPERAFDFGQLPNAGIGLARLEMIIAAHIGVHPKALLEYHKQDADTKQKIDA CEEEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCH KIAGYPDPVSFYVNRLAEGIATLTASVAPHTVIVRLSDFKSNEYAHLIGGQHYEPQEENP HCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCC MLGFRGASRYVDPSFSDAFALECKAVLKVRNEMGLDNLWVMIPFVRTLEEGRKVIDVLRQ CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH NGLKQGENGLKVIMMCEVPSNALLADEFLDIFDGFSIGSNDLTQLSLGLDRDSSIVAPLF CCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEECCCC DERNPAVKKLLSMAIKAARSKGKYIGICGQGPSDHPDLAEWLMQEGIESLSLNPDTVVDT CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCHHHCCCCCHHHHHH WLRLAKLKTVH HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]