| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199928
Identifier: 28199928
GI number: 28199928
Start: 2448095
End: 2448478
Strand: Reverse
Name: 28199928
Synonym: PD2068
Alternate gene names: NA
Gene position: 2448478-2448095 (Counterclockwise)
Preceding gene: 28199929
Following gene: 28199924
Centisome position: 97.17
GC content: 58.33
Gene sequence:
>384_bases GTGATCAATGGTGATGACGGTTTGAGTGGTCAGTTCTTGCCACCTTTTTTCTTAATCGGATCGGCTTCCAGATCGCCGTA CCAGAGGACGTTGGAGCCGTGCAGCAGGACGGTGCCGAACACGACAGGAATCGGTCGGCGTTCTTCTGCGGTTGGGGCAT CAATGTCGGACAGGGACGCCGGTTTGGGCTCGGGCGGTTTCGGGGCGAGTGCGACCGAAATCAGTGCCGCTACGACGATG ACGAGGAGGGACTGCATGGCGATTTCTCTAGGAATTAAGAAAACGCCCGTCGAGAAGGGGTTTTTGCTCGGGATGGCGGG AAAGCCGCCGGGGTTGTCGAGGTTGCCGAAACGTGACTCGCACGTGGCTGTGCTGTGGTCTTAG
Upstream 100 bases:
>100_bases TTGCGGTGTCACAGTCATCGCGCAGGAAGGCGCGAAAATCCAGCGCGTGACGCGCAAACCACGTGCGCGTGCGGTTCACG TATAGGCCCACGGTGCGCAT
Downstream 100 bases:
>100_bases TCGACCGTCAGCAGCCCCTCGGTGCCGACTTCAATGGCCACCGGATAGAGCAAGCGAAGAAGTCAGCCGATGGCCCGAAA ATCTGTGCCAACACACGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MINGDDGLSGQFLPPFFLIGSASRSPYQRTLEPCSRTVPNTTGIGRRSSAVGASMSDRDAGLGSGGFGASATEISAATTM TRRDCMAISLGIKKTPVEKGFLLGMAGKPPGLSRLPKRDSHVAVLWS
Sequences:
>Translated_127_residues MINGDDGLSGQFLPPFFLIGSASRSPYQRTLEPCSRTVPNTTGIGRRSSAVGASMSDRDAGLGSGGFGASATEISAATTM TRRDCMAISLGIKKTPVEKGFLLGMAGKPPGLSRLPKRDSHVAVLWS >Mature_127_residues MINGDDGLSGQFLPPFFLIGSASRSPYQRTLEPCSRTVPNTTGIGRRSSAVGASMSDRDAGLGSGGFGASATEISAATTM TRRDCMAISLGIKKTPVEKGFLLGMAGKPPGLSRLPKRDSHVAVLWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13216; Mature: 13216
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINGDDGLSGQFLPPFFLIGSASRSPYQRTLEPCSRTVPNTTGIGRRSSAVGASMSDRDA CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GLGSGGFGASATEISAATTMTRRDCMAISLGIKKTPVEKGFLLGMAGKPPGLSRLPKRDS CCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCC HVAVLWS CEEEEEC >Mature Secondary Structure MINGDDGLSGQFLPPFFLIGSASRSPYQRTLEPCSRTVPNTTGIGRRSSAVGASMSDRDA CCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GLGSGGFGASATEISAATTMTRRDCMAISLGIKKTPVEKGFLLGMAGKPPGLSRLPKRDS CCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCC HVAVLWS CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA