| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199929
Identifier: 28199929
GI number: 28199929
Start: 2448941
End: 2449366
Strand: Reverse
Name: 28199929
Synonym: PD2069
Alternate gene names: NA
Gene position: 2449366-2448941 (Counterclockwise)
Preceding gene: 28199930
Following gene: 28199928
Centisome position: 97.2
GC content: 48.36
Gene sequence:
>426_bases TTGCGCCGTTCGATGGATGAGTGGTCCGATATTGATGAGATGGTCTTTTTTAGCGATGGCAGTGCTACTTCTGCAGACGT ATCTGAGTCGATTAAAGGCTTTTGTCGAGAGGTGCTGAGGTGCTATGGATTGTCGGAGGTTGATCAATCCAGTCCAAGGA GCGTGCTTGAGCTGAATGACATCACATTCGATTTGGTGGCAGTGACAAAAATAGGGTTCGGAGAGATCCAGATTCTCAAT GGCTCGGGTGGTTGGATGAGCACGAATCCGAATGACTTCAATGCGATGCGTGAAGCAAGGAATAAGGACATCGGCGCTTT GATCAAGCCAACCATCCGTTTGATGAAATACTGGAATGTGGCCAGCGGGTTCCTATTCGATTCATTTGCGCTGGAATCGT GGATTTGTGGTCAGGGTTTCTGGTGA
Upstream 100 bases:
>100_bases AACGTCAATCACAACGCTTTAATCCCGGATGGCGCTGTATTTTGACAGGGGCGTGATCGCTCAGAATTTCCAATTCGGGT CATCAGGGTGAGGCACGATT
Downstream 100 bases:
>100_bases CAGTCAATCCAAAGGACGATCTGTTTTCGGTCGTCGACAATCTGAGCACTCATTTGTCTGACTCGCAATGAGTCAATCAT GAAATGAGGCGTGCAAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MRRSMDEWSDIDEMVFFSDGSATSADVSESIKGFCREVLRCYGLSEVDQSSPRSVLELNDITFDLVAVTKIGFGEIQILN GSGGWMSTNPNDFNAMREARNKDIGALIKPTIRLMKYWNVASGFLFDSFALESWICGQGFW
Sequences:
>Translated_141_residues MRRSMDEWSDIDEMVFFSDGSATSADVSESIKGFCREVLRCYGLSEVDQSSPRSVLELNDITFDLVAVTKIGFGEIQILN GSGGWMSTNPNDFNAMREARNKDIGALIKPTIRLMKYWNVASGFLFDSFALESWICGQGFW >Mature_141_residues MRRSMDEWSDIDEMVFFSDGSATSADVSESIKGFCREVLRCYGLSEVDQSSPRSVLELNDITFDLVAVTKIGFGEIQILN GSGGWMSTNPNDFNAMREARNKDIGALIKPTIRLMKYWNVASGFLFDSFALESWICGQGFW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15845; Mature: 15845
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSMDEWSDIDEMVFFSDGSATSADVSESIKGFCREVLRCYGLSEVDQSSPRSVLELND CCCCCCHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCC ITFDLVAVTKIGFGEIQILNGSGGWMSTNPNDFNAMREARNKDIGALIKPTIRLMKYWNV CEEEHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ASGFLFDSFALESWICGQGFW HCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRRSMDEWSDIDEMVFFSDGSATSADVSESIKGFCREVLRCYGLSEVDQSSPRSVLELND CCCCCCHHCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCC ITFDLVAVTKIGFGEIQILNGSGGWMSTNPNDFNAMREARNKDIGALIKPTIRLMKYWNV CEEEHHHHEECCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ASGFLFDSFALESWICGQGFW HCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA