| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28199268
Identifier: 28199268
GI number: 28199268
Start: 1606771
End: 1607268
Strand: Reverse
Name: 28199268
Synonym: PD1384
Alternate gene names: NA
Gene position: 1607268-1606771 (Counterclockwise)
Preceding gene: 28199269
Following gene: 28199267
Centisome position: 63.79
GC content: 50.0
Gene sequence:
>498_bases ATGGCTATCGAAATAGAACGTAAATTCCTGGTTGTTGGGGAAGGTTGGCGTGCTGCTGCGCATAGGGTGATTCCGATGAC TCAAGGGTATATCAATGACCAAAAAGTATTGGGAAAGGGGACGCAAAAGGCGTCGGTGCGGGTGCGTATTCAAGAGGATG CGGCGTATCTCAATCTTAAATCGGTGGCATTCGGTCATACTCGGCAGGAGTTCGAATATGCAATTCCTTTGAGTGATGCG CGTGATTTGCTTGCGTTGTGTGTGGGGGGATTGATTGATAAGCGCCGTCATTTGGTGTGTTATGCGGGTCACGTGTGGGA GGTGGATGAGTTTTTAGGTGATAACGCTGGTTTGGTTGTGGCTGAGATTGAGTTGGACAGTGCACATGAGGGTTTTGTGT TGCCGGATTGGCTTGGTGTCGAGGTGACTGATGACGCACGTTACTACAGTCTGGCTCTGGCTTCGCATCCGTTTGTTTGT TGGGGTGCATCAGTCTGA
Upstream 100 bases:
>100_bases GCGCATGTGGAGAGTATTGCTGTATTTGATCGTTGCTGAGTGATCCGAAGAGTGTTGCACGGTCTGATTCGCTCTGACTT TTTCTGAATTTTATAAAATT
Downstream 100 bases:
>100_bases ATCTTTTGTTGTGTGCGCCCGTATTGCTTGTTGTCGTGGTGAGTTGTTTGTTAAGCGGTGTGTTATTTGTAGTGTGAGGT AGTAATCAGGTTGGTGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Adenylate Cyclase Family Protein; Adenylate Cyclase Protein; Adenylate Cyclase-Like Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAIEIERKFLVVGEGWRAAAHRVIPMTQGYINDQKVLGKGTQKASVRVRIQEDAAYLNLKSVAFGHTRQEFEYAIPLSDA RDLLALCVGGLIDKRRHLVCYAGHVWEVDEFLGDNAGLVVAEIELDSAHEGFVLPDWLGVEVTDDARYYSLALASHPFVC WGASV
Sequences:
>Translated_165_residues MAIEIERKFLVVGEGWRAAAHRVIPMTQGYINDQKVLGKGTQKASVRVRIQEDAAYLNLKSVAFGHTRQEFEYAIPLSDA RDLLALCVGGLIDKRRHLVCYAGHVWEVDEFLGDNAGLVVAEIELDSAHEGFVLPDWLGVEVTDDARYYSLALASHPFVC WGASV >Mature_164_residues AIEIERKFLVVGEGWRAAAHRVIPMTQGYINDQKVLGKGTQKASVRVRIQEDAAYLNLKSVAFGHTRQEFEYAIPLSDAR DLLALCVGGLIDKRRHLVCYAGHVWEVDEFLGDNAGLVVAEIELDSAHEGFVLPDWLGVEVTDDARYYSLALASHPFVCW GASV
Specific function: Unknown
COG id: COG2954
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18314; Mature: 18183
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIEIERKFLVVGEGWRAAAHRVIPMTQGYINDQKVLGKGTQKASVRVRIQEDAAYLNLK CEEEEEEEEEEEECCCHHHCEEEEECCCCCCCCCCEECCCCCCEEEEEEEECCCEEEEEE SVAFGHTRQEFEYAIPLSDARDLLALCVGGLIDKRRHLVCYAGHVWEVDEFLGDNAGLVV HEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEHHHHHCCCCCEEE AEIELDSAHEGFVLPDWLGVEVTDDARYYSLALASHPFVCWGASV EEEEECCCCCCEECCCCCCEEEECCCEEEEEEECCCCEEEEECCC >Mature Secondary Structure AIEIERKFLVVGEGWRAAAHRVIPMTQGYINDQKVLGKGTQKASVRVRIQEDAAYLNLK EEEEEEEEEEEECCCHHHCEEEEECCCCCCCCCCEECCCCCCEEEEEEEECCCEEEEEE SVAFGHTRQEFEYAIPLSDARDLLALCVGGLIDKRRHLVCYAGHVWEVDEFLGDNAGLVV HEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCEEEHHHHHCCCCCEEE AEIELDSAHEGFVLPDWLGVEVTDDARYYSLALASHPFVCWGASV EEEEECCCCCCEECCCCCCEEEECCCEEEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA