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The map label for this gene is slpD [C]

Identifier: 28199246

GI number: 28199246

Start: 1584372

End: 1585946

Strand: Reverse

Name: slpD [C]

Synonym: PD1362

Alternate gene names: 28199246

Gene position: 1585946-1584372 (Counterclockwise)

Preceding gene: 28199247

Following gene: 28199245

Centisome position: 62.94

GC content: 53.9

Gene sequence:

>1575_bases
TTGGAGCATGGATGTACCGTCCGAAGAGAAGGAACACGGATGTTGAAGAAATATTGGATAGTTCTAGCGCTTGTTGTGGG
GGGTATTTTTGTTTATTTCCCAACGCGTGTAGCCGCTTCGTCATTTGAAGCCTCATCAGCTGCAACACTGCAACCTGTGG
TCCGCTCCTATGGCCGTTTGCGTTTTGAACCATGCACACTGAGTGCTCGTGGTGCCGGACACATCAGGGTGCTCTGCGCG
CAACTGCCGATCCTTGAGAATCCTGCGTTACCTGAAGGACGTAGGATTACCCTGAAGATTGCTTGGCTGGAGCGTGACAG
CGGTAGTCATCCTGCCTCAGATCCGGTTTTTTTCATTGCTGGAGGTCCGGGCCAATCAGCAACTGGAGTCGTTGCTGCGG
TGGCACCTAGTCTGAATGAGGTACGTAAAAAGCGTGACATCTTTTTCGTGGATCAGCGTGGTACGGGTGGTTCGCATCCG
CTCACCTGCGTAGATGCGCAGGGGAGGGCGCTTCAGCTGGAGGCAGAGAACACCACGACACCAGAGCAATACATCGCCTT
TGTACAGCGTTGCGCTGCTTCGCTACAGGGGCGTGCTGATCCTCGCTATTACACCACTACCGAAGCTGTCACCGATTTAG
ATATGGTTCGGACTGCACTCAGCGTGGATAAAATCAACCTGATTGGCGTCTCTTACGGCACTCGAGTGGCGCAGCACTAT
GCACGTCGTTATCGTGCCCACGTCCGTACCTTGACGATGGATGGAGTAGTTCCGAATGACTTGGTGATCGGTAGTGAATT
TGCTACTACATTCGAGAATGCAATTGCGTTGCAGGATGCGCAGTGCCGTAAGGATCCATCCTGCGCCAAGCGTTTTCCGA
TTGACAGTCGGCAGCAACTGCGTACTTTGATGGAGCGTCTCCGTCAGGGCAGCGAGGTGGAGTATCAGGATCCTGCTTCC
GGTGAGATGCGCCGCCGCCGTATCACTGCCGACACCGTGGTTAGCTTAGCCTTTGGTCTCTCGTATGCACCAGAGCTGAT
TGCATTGTTGCCGTTGATTTTGAATGAGGCCGCTTCAGGGCATTACGCGCCATTGATGTCGTTGTCTCAGCTTGTCCAGC
GTGGCATGGACGATCAGATGAACCATGCGCTGCACTGGTCTGTCATTTGTACTGAGGATGCGGACCGCTACGTGACAAGT
GCAAGTGCAGGAGGTGCCCTGTTTGGACCAAAGGTTGCACAGATGTTTTTTACGCCCTGCAAAGTTTGGCCTACTGGTGT
CCGTCCGCCTGATTTCATGATGCCGTTGGTTTCCGATCTTCCGGCATTGTTGCTCTCAGGTGAGCGTGATCCTGTGACGC
CGCCCCATTACGCCGAAAAGTTGCTTAAGGGCTTGCGTTACGGTCGTCACATCGTGGCACCGGGCCAGGGCCATGGCACC
ATCCGTGTTGGATGTGTGTCCAAGTTGCTTGGCCAGTTTATTGATCGTGCTGATGCTACGTCCCTTGATACAACCTGTGT
GCAGCGTCTCGTTAACGTGCCAGTATTCACCTCGTTCAACGGGTGGGAACCATGA

Upstream 100 bases:

>100_bases
GTGGCTATTGTTCATCAACAGTATTCAATGAAGTGCGATTGCGAGTGATATCCAGCTACAATGAATGAATGTTTACTGAA
TTATTATTCCAGGGGATACC

Downstream 100 bases:

>100_bases
TTACCGCTGAACATCTTCATAAGTCCTTCAAGACCAAGAAGGGGCTGGTTAATGCGGTAAAGGACCTCAGTTTCCACGCT
GCTGATGGTCGAATCACGGG

Product: proteinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MEHGCTVRREGTRMLKKYWIVLALVVGGIFVYFPTRVAASSFEASSAATLQPVVRSYGRLRFEPCTLSARGAGHIRVLCA
QLPILENPALPEGRRITLKIAWLERDSGSHPASDPVFFIAGGPGQSATGVVAAVAPSLNEVRKKRDIFFVDQRGTGGSHP
LTCVDAQGRALQLEAENTTTPEQYIAFVQRCAASLQGRADPRYYTTTEAVTDLDMVRTALSVDKINLIGVSYGTRVAQHY
ARRYRAHVRTLTMDGVVPNDLVIGSEFATTFENAIALQDAQCRKDPSCAKRFPIDSRQQLRTLMERLRQGSEVEYQDPAS
GEMRRRRITADTVVSLAFGLSYAPELIALLPLILNEAASGHYAPLMSLSQLVQRGMDDQMNHALHWSVICTEDADRYVTS
ASAGGALFGPKVAQMFFTPCKVWPTGVRPPDFMMPLVSDLPALLLSGERDPVTPPHYAEKLLKGLRYGRHIVAPGQGHGT
IRVGCVSKLLGQFIDRADATSLDTTCVQRLVNVPVFTSFNGWEP

Sequences:

>Translated_524_residues
MEHGCTVRREGTRMLKKYWIVLALVVGGIFVYFPTRVAASSFEASSAATLQPVVRSYGRLRFEPCTLSARGAGHIRVLCA
QLPILENPALPEGRRITLKIAWLERDSGSHPASDPVFFIAGGPGQSATGVVAAVAPSLNEVRKKRDIFFVDQRGTGGSHP
LTCVDAQGRALQLEAENTTTPEQYIAFVQRCAASLQGRADPRYYTTTEAVTDLDMVRTALSVDKINLIGVSYGTRVAQHY
ARRYRAHVRTLTMDGVVPNDLVIGSEFATTFENAIALQDAQCRKDPSCAKRFPIDSRQQLRTLMERLRQGSEVEYQDPAS
GEMRRRRITADTVVSLAFGLSYAPELIALLPLILNEAASGHYAPLMSLSQLVQRGMDDQMNHALHWSVICTEDADRYVTS
ASAGGALFGPKVAQMFFTPCKVWPTGVRPPDFMMPLVSDLPALLLSGERDPVTPPHYAEKLLKGLRYGRHIVAPGQGHGT
IRVGCVSKLLGQFIDRADATSLDTTCVQRLVNVPVFTSFNGWEP
>Mature_524_residues
MEHGCTVRREGTRMLKKYWIVLALVVGGIFVYFPTRVAASSFEASSAATLQPVVRSYGRLRFEPCTLSARGAGHIRVLCA
QLPILENPALPEGRRITLKIAWLERDSGSHPASDPVFFIAGGPGQSATGVVAAVAPSLNEVRKKRDIFFVDQRGTGGSHP
LTCVDAQGRALQLEAENTTTPEQYIAFVQRCAASLQGRADPRYYTTTEAVTDLDMVRTALSVDKINLIGVSYGTRVAQHY
ARRYRAHVRTLTMDGVVPNDLVIGSEFATTFENAIALQDAQCRKDPSCAKRFPIDSRQQLRTLMERLRQGSEVEYQDPAS
GEMRRRRITADTVVSLAFGLSYAPELIALLPLILNEAASGHYAPLMSLSQLVQRGMDDQMNHALHWSVICTEDADRYVTS
ASAGGALFGPKVAQMFFTPCKVWPTGVRPPDFMMPLVSDLPALLLSGERDPVTPPHYAEKLLKGLRYGRHIVAPGQGHGT
IRVGCVSKLLGQFIDRADATSLDTTCVQRLVNVPVFTSFNGWEP

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 57476; Mature: 57476

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHGCTVRREGTRMLKKYWIVLALVVGGIFVYFPTRVAASSFEASSAATLQPVVRSYGRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCE
RFEPCTLSARGAGHIRVLCAQLPILENPALPEGRRITLKIAWLERDSGSHPASDPVFFIA
EECCCEEECCCCCCEEEHEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEE
GGPGQSATGVVAAVAPSLNEVRKKRDIFFVDQRGTGGSHPLTCVDAQGRALQLEAENTTT
CCCCCCCCCCHHHHCCCHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCC
PEQYIAFVQRCAASLQGRADPRYYTTTEAVTDLDMVRTALSVDKINLIGVSYGTRVAQHY
HHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHH
ARRYRAHVRTLTMDGVVPNDLVIGSEFATTFENAIALQDAQCRKDPSCAKRFPIDSRQQL
HHHHHHHHHEEEECCCCCCCEEECCHHHHHHHHHHHCCCHHCCCCCCHHHHCCCCCHHHH
RTLMERLRQGSEVEYQDPASGEMRRRRITADTVVSLAFGLSYAPELIALLPLILNEAASG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HYAPLMSLSQLVQRGMDDQMNHALHWSVICTEDADRYVTSASAGGALFGPKVAQMFFTPC
CHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCHHHEECCCCCCCCCCHHHHHHHHCCH
KVWPTGVRPPDFMMPLVSDLPALLLSGERDPVTPPHYAEKLLKGLRYGRHIVAPGQGHGT
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCC
IRVGCVSKLLGQFIDRADATSLDTTCVQRLVNVPVFTSFNGWEP
EEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure
MEHGCTVRREGTRMLKKYWIVLALVVGGIFVYFPTRVAASSFEASSAATLQPVVRSYGRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCE
RFEPCTLSARGAGHIRVLCAQLPILENPALPEGRRITLKIAWLERDSGSHPASDPVFFIA
EECCCEEECCCCCCEEEHEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEE
GGPGQSATGVVAAVAPSLNEVRKKRDIFFVDQRGTGGSHPLTCVDAQGRALQLEAENTTT
CCCCCCCCCCHHHHCCCHHHHHHHCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCCC
PEQYIAFVQRCAASLQGRADPRYYTTTEAVTDLDMVRTALSVDKINLIGVSYGTRVAQHY
HHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHH
ARRYRAHVRTLTMDGVVPNDLVIGSEFATTFENAIALQDAQCRKDPSCAKRFPIDSRQQL
HHHHHHHHHEEEECCCCCCCEEECCHHHHHHHHHHHCCCHHCCCCCCHHHHCCCCCHHHH
RTLMERLRQGSEVEYQDPASGEMRRRRITADTVVSLAFGLSYAPELIALLPLILNEAASG
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
HYAPLMSLSQLVQRGMDDQMNHALHWSVICTEDADRYVTSASAGGALFGPKVAQMFFTPC
CHHHHHHHHHHHHCCCCHHHCCCEEEEEEEECCCHHHEECCCCCCCCCCHHHHHHHHCCH
KVWPTGVRPPDFMMPLVSDLPALLLSGERDPVTPPHYAEKLLKGLRYGRHIVAPGQGHGT
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCCC
IRVGCVSKLLGQFIDRADATSLDTTCVQRLVNVPVFTSFNGWEP
EEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]