| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198877
Identifier: 28198877
GI number: 28198877
Start: 1174955
End: 1175938
Strand: Reverse
Name: 28198877
Synonym: PD0978
Alternate gene names: NA
Gene position: 1175938-1174955 (Counterclockwise)
Preceding gene: 28198878
Following gene: 28198876
Centisome position: 46.67
GC content: 57.42
Gene sequence:
>984_bases ATGAACATGATTGACATACGCCGCCGTCAGATAGCCGATGCGTTGAACCCGATGTTGCTGACCGATGCACGGTATCAGAC CTGTGATGCCACCCAAGCGCTGGCGTTTTTGGTGTCGCAACTGACCCATGTTGAATCGACGATCTACGCCCGCCAGCGCC AAGGCATCCAGTACCGGGATTTGGTGCCCATCAGCACCGAAGCGTGCGAGTACGCCACCTCGGTGACCTATCAAATGTAT GACTATTCCGGACGGGGCAAGCGGCATTCTGGACGGGGCGAAGATATTCCGACGGTCGATGTGGCCTACGCACAAAAGAG CGTGCCTGTCGTGTTGGGCACCATTGGCTACGATTACACCACCGAGGAACTGCGCCAATCGGCCTTTCTGCGTAAACCCC TCAACACCGCGCGGGCCGATGCGGCGATGGATGCCTATGAGCGCCATATCAACGATGTGGCGTTGTTTGGTGAGGACGAA CTCACCGGCCTGTATACCCATCCTGGCGTGCCGGTCCTGTTGAACACCGCCGGACCTTGGATCGGTCAATCGCCCGCCCA GGTGCTAGCCTTGTTCAACGCCCTGATCTCCAGCGCTTGGATGAACACCCACTATGTGGAGATGATCGATACCGTTCTCT TGCCTGGTAGCGTGATGAACTATCTGGTGTCCACCCCGCGCAGTGACAACAGCGATAAAACCATTCTGCATTACGTGCTG GAAAACAACATTGCCAAAGCTGAGCGTGGCCTTGATCTGACCGTCCGCACCGGCTACGGCTTAGAGACGGCAGGGGAAGG CGGCACGACCCGCGCCATGCTGTATACGAAGAACCCCACCAAGCTGGTGCTGCATCTGCCCATGCCGATCCGGTTTTTGC CCCCGCAACCCAAGGGCCTGACGTTTGATATTCCAGGCGAATACAAATACAGCGGCGTGGAGTTCCGTTATCCCAAGTCC GCCCTGTATGCCGACGGCATTTGA
Upstream 100 bases:
>100_bases CATCGCTTCAGACACCATTCCCTACCCCCAGGCCATCTGGGATAGCACGAGCGCCCCCGGAGCGCTGGGCGTAATCCGCA TTCTTAAATAAGGGACCTGC
Downstream 100 bases:
>100_bases GTCTGAGGCCACACACATGACACCAGCGCCCTGAGGCGCTTTTTTTTGGGAGAACGCAGCACCATGACCACGATCATGCT CAAGAACACCCGCAGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Exported Phage Protein
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGLTFDIPGEYKYSGVEFRYPKS ALYADGI
Sequences:
>Translated_327_residues MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGLTFDIPGEYKYSGVEFRYPKS ALYADGI >Mature_327_residues MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRDLVPISTEACEYATSVTYQMY DYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYTTEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDE LTGLYTHPGVPVLLNTAGPWIGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGLTFDIPGEYKYSGVEFRYPKS ALYADGI
Specific function: Unknown
COG id: COG4834
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36402; Mature: 36402
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRD CCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVPISTEACEYATSVTYQMYDYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYT CCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC TEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDELTGLYTHPGVPVLLNTAGPW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEECCCCC IGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEHHHH ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGL HCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCE TFDIPGEYKYSGVEFRYPKSALYADGI EEECCCCEEECCEEEECCCCCCCCCCC >Mature Secondary Structure MNMIDIRRRQIADALNPMLLTDARYQTCDATQALAFLVSQLTHVESTIYARQRQGIQYRD CCCHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LVPISTEACEYATSVTYQMYDYSGRGKRHSGRGEDIPTVDVAYAQKSVPVVLGTIGYDYT CCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCC TEELRQSAFLRKPLNTARADAAMDAYERHINDVALFGEDELTGLYTHPGVPVLLNTAGPW HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEECCCCCEEEECCCCC IGQSPAQVLALFNALISSAWMNTHYVEMIDTVLLPGSVMNYLVSTPRSDNSDKTILHYVL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHEEHHHH ENNIAKAERGLDLTVRTGYGLETAGEGGTTRAMLYTKNPTKLVLHLPMPIRFLPPQPKGL HCCHHHHHCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCE TFDIPGEYKYSGVEFRYPKSALYADGI EEECCCCEEECCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA