Click here to switch to the map view.

The map label for this gene is 28198878

Identifier: 28198878

GI number: 28198878

Start: 1175948

End: 1176430

Strand: Reverse

Name: 28198878

Synonym: PD0979

Alternate gene names: NA

Gene position: 1176430-1175948 (Counterclockwise)

Preceding gene: 28198879

Following gene: 28198877

Centisome position: 46.69

GC content: 60.87

Gene sequence:

>483_bases
ATGTCCGGAATTGACTTATCCACCTATGGTGGGCGCTTACTTGATCTTGGCGTTGCGGGGCAAGTGATCGACTTGAACAC
CAGCGGCCTGTGCAACTACAAAAACGCCGGAGAAACCCCGATTGATTTTGGCTTATTTGTGGCACGCGGCCCCAAAGACG
CCACCTGCAAAGCCCCCGATGGGGCAGATGCCGCCATCCTGGGGATCAGTGTCCGCCATGTCACGATGGTGGCTGATGCG
GCCGGACAGGTCCGCTATGCCCCCCATGCGATGGTGCCGGTGTTGGAGATCGGTCGCATCTGGGTGATCTGCGAGGATGG
CTGCCGCCCGGATGATCCGGTGTTTATCCGCATTGCGGGAACGGGGGCCTGGGGCGCGGCCCGATCTGCCGCCATCGCTT
CAGACACCATTCCCTACCCCCAGGCCATCTGGGATAGCACGAGCGCCCCCGGAGCGCTGGGCGTAATCCGCATTCTTAAA
TAA

Upstream 100 bases:

>100_bases
GATCGTCAAGACATCGGATGCCGACCTGGACCCGCGAGCGGCGTATATCCAGCAGCTCACCCACGCCACCTATAGCACTT
CAGCACCCTAAGGAACACGC

Downstream 100 bases:

>100_bases
GGGACCTGCATGAACATGATTGACATACGCCGCCGTCAGATAGCCGATGCGTTGAACCCGATGTTGCTGACCGATGCACG
GTATCAGACCTGTGATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MSGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPDGADAAILGISVRHVTMVADA
AGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAGTGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK

Sequences:

>Translated_160_residues
MSGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPDGADAAILGISVRHVTMVADA
AGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAGTGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK
>Mature_159_residues
SGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPDGADAAILGISVRHVTMVADAA
GQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAGTGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16607; Mature: 16476

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPD
CCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCC
GADAAILGISVRHVTMVADAAGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAG
CCCEEEEEEEEEEEEEEECCCCCEEECCCCCCCEEECCEEEEEECCCCCCCCCEEEEEEC
TGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK
CCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SGIDLSTYGGRLLDLGVAGQVIDLNTSGLCNYKNAGETPIDFGLFVARGPKDATCKAPD
CCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEECCCC
GADAAILGISVRHVTMVADAAGQVRYAPHAMVPVLEIGRIWVICEDGCRPDDPVFIRIAG
CCCEEEEEEEEEEEEEEECCCCCEEECCCCCCCEEECCEEEEEECCCCCCCCCEEEEEEC
TGAWGAARSAAIASDTIPYPQAIWDSTSAPGALGVIRILK
CCCCCCCCCCEECCCCCCCCHHHCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA