| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is 28198131
Identifier: 28198131
GI number: 28198131
Start: 259523
End: 260011
Strand: Reverse
Name: 28198131
Synonym: PD0203
Alternate gene names: NA
Gene position: 260011-259523 (Counterclockwise)
Preceding gene: 28198133
Following gene: 28198130
Centisome position: 10.32
GC content: 49.69
Gene sequence:
>489_bases GTGCCGATGTCATCTCACGCAACTCTAAATAACCGTCACATTTATTCCGAATCGCCTGAGCGCAACTGGCCATACCGCGT GGAATATTGCAAAAATCCGACCATCGCAGGGGCGCTAGACGGGAAACGACATGTGATGCTGCTGACCATCAATGAAATAA ATGCCCCACCGAAACGTATGAACAATGCCCATGCCAGATGTCTTCTTCAATGTACGCGCAACCGACGGCAGCACAAGGGA TTCAACAACAATCACGGCCAACAACAACTGAAATCAACATCAAACCGCAAATCCAAACAACCGCTCCCCATCCAAGCTGT GCCAGCATCCACCAACAAAGTCAGCCGCAACGGCTGCCATGCTCAAAAACCGCACTACTCCACTGGACACTCCGAAATTT TGGAAGCACATCGCTGTGCATCACACATGACCACATTAGATGTAACGCCGCCCTCTGCGTTCATTGCACATCAAATCCCG CATAAATAA
Upstream 100 bases:
>100_bases ATCCCCAGAGCAAGACGCAGACATGGATTTGCAATTGCGCCGTGCGCACTTTGGAAGAGATCAGCATCTTGACTATTGTC CCTGAAATTATCTTTTCACT
Downstream 100 bases:
>100_bases TGCATCAAGCACAGATGCAAGTGATCGGTCTCACACCCAACCCACTGCAGCAGTGCCTTCCAGTGATTGGTGTTGGCATC CTCCACATCACTGCAAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPMSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNNAHARCLLQCTRNRRQHKG FNNNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIP HK
Sequences:
>Translated_162_residues MPMSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNNAHARCLLQCTRNRRQHKG FNNNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIP HK >Mature_161_residues PMSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRMNNAHARCLLQCTRNRRQHKGF NNNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCHAQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPH K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18336; Mature: 18205
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRM CCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCHHHH NNAHARCLLQCTRNRRQHKGFNNNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCH CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC AQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPHK CCCCCCCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHCCCCC >Mature Secondary Structure PMSSHATLNNRHIYSESPERNWPYRVEYCKNPTIAGALDGKRHVMLLTINEINAPPKRM CCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEECCCCCCHHHH NNAHARCLLQCTRNRRQHKGFNNNHGQQQLKSTSNRKSKQPLPIQAVPASTNKVSRNGCH CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCC AQKPHYSTGHSEILEAHRCASHMTTLDVTPPSAFIAHQIPHK CCCCCCCCCHHHHHHHHHHHHHCEEEECCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA