| Definition | Xylella fastidiosa Temecula1, complete genome. |
|---|---|
| Accession | NC_004556 |
| Length | 2,519,802 |
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The map label for this gene is deaD [H]
Identifier: 28198133
GI number: 28198133
Start: 261295
End: 263142
Strand: Reverse
Name: deaD [H]
Synonym: PD0205
Alternate gene names: 28198133
Gene position: 263142-261295 (Counterclockwise)
Preceding gene: 28198134
Following gene: 28198131
Centisome position: 10.44
GC content: 57.09
Gene sequence:
>1848_bases GTGCTCTCCGGAGTTCTCATGTCAAATCCATCTTCTACACCGCTGCTGTTTGCAGATCTCGGCCTCTCCGATGCTGTGAT GCAAGCCGTCACAAAAATCGGCTACGAAACTCCGTCGCCCATCCAGGCGGCGACCATCCCAGCCTTGCTTGCTGGGCGCG ATGTGCTGGGCCAAGCCCAGACCGGCACTGGGAAGACTGCCGCATTCGCGCTACCGTTGCTCACACGCACCGTTCTGAAC CAGGTCAAGCCGCAAGTGCTCGTACTGGCACCCACCCGCGAACTGGCTATCCAAGTTGCCGAAGCATTCCAGCGCTATGC TGCCTCGATCTCTGGCTTCCGTGTCCTACCCGTGTACGGCGGCCAATCCTATGGCCAACAACTGGCCGCACTGAAACGCG GTGTCCATGTGATCGTCGGTACCCCGGGCCGGGTGATTGATCACCTAGAGCGCGGCACCCTGGATCTATCGGAATTAAAA ACGCTGGTCCTCGACGAAGCCGACGAAATGCTGCGTATGGGTTTCATTGAGGACGTTGAAGAAGTCCTACGGAAGTTGCC CGCTTCACGCCAGGTCGCTCTGTTCTCGGCAACCATGCCACCACAGATCCGCCGTATCGCACAAACCTATCTACAAGATC CGATTGAAGTCACCATCGCCACCAAAACCACGACCGCAGCCAACATCCGCCAACGTTACTGGTGGGTCAGCGGCCTCCAC AAGCTAGATGCACTCACACGCATTCTTGAGGTGGAAACCTTCGACGCAATGATTATCTTCGTGCGCACCAAAGCTGCCAC CGAAGAATTGGCCGAGAAATTGCAGGCACGTGGCCTGACCGCCGCAGCGATCAATGGCGATATGCAACAAGCGCAACGCG AACGCACCATTCACCAACTCAAAGATGGCAAGCTGGATATCCTCGTTGCCACCGACGTCGCCGCACGTGGTTTGGACGTA GAACGTATCAGCCACGTGCTGAACTACGACATCCCTTACGACGTTGAGAGCTACGTCCACCGTATCGGACGCACTGGGCG TGCCGGTCGCAGCGGCGAAGCAATCCTCTTTGTGACTCCGCGCGAAAAAGGCATGCTGCGCCAGATTGAACGTGCCACTC ACCAACCGATCGAAGCCATGCAACTGCCCAGTGTGGATGCAGTCAACGACACGCGCGTGACCAAATTTTTCGGACGCATC AGCAATGCTCTGGTGGTCGGCGCTGAAATCGACTTCTACCGCAAACTGCTACAACGTTTCGAGAGCGAGCACAATGTCCC TGCCATTGAGATCGCTGCTGCCCTGGCACGACTCCTTCAGGGGGATAGCCCCTTCCTGCTGAGTGTCCCGACGCGCCCCC AACGCGAGCGCAGCGAGCTGGCATCCGAGCATCATGTCAAACGCCCCTCATCCTTCAAGCAGACAGAGCGTCCAAACAAC ACTGAACACCCCAAGCGCCCCCAACGGAACGCACCTGCCCGCAATGTCCCAGAGTTCGGTATGGAGTCTTACCGCATCGA AGTCGGCCGCATGCACGGTGTGAAGCCAGCCAATATCGTCGGCGCTATCGCCAACGAAGCTGGATTAGAGAGCCGCTACA TTGGCCGGATTGACATCCGTGACGATCACTCGGTTCTGGATCTCCCCGCAGAAATGCCACACGAGATCCTGCAACACCTA AAAAAGGTCTGGGTATCAGGACAGCAACTACAAATGCGTCGGATCGACACAACCGAAACAACCGCACCTGCACGGGAATT TAAGTCAAAACCGGGTGGCGCTGGCAAATTCCCGCCGAAACCGCATCACAACAAATCAACCAAACCAAAACCACCATACA GCGGTTGA
Upstream 100 bases:
>100_bases ACGAGCGATGCCTCACACCTGAACCAACCCCTTGTGAACGTTTCGACAACAACCCATATTAAAGCGCACAATACCCCCCT GAGGCCGCTCAGTTGCGGCG
Downstream 100 bases:
>100_bases ATCCCCTGCGATCGCATTAATCCACAGCCGCGCGCGCCCACCGACATCCCTTCCGTGGGCGCCGTGCTGAAGCATTACCG CCAACCTTTACACAATGCGA
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MLSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLN QVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELK TLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLH KLDALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQLKDGKLDILVATDVAARGLDV ERISHVLNYDIPYDVESYVHRIGRTGRAGRSGEAILFVTPREKGMLRQIERATHQPIEAMQLPSVDAVNDTRVTKFFGRI SNALVVGAEIDFYRKLLQRFESEHNVPAIEIAAALARLLQGDSPFLLSVPTRPQRERSELASEHHVKRPSSFKQTERPNN TEHPKRPQRNAPARNVPEFGMESYRIEVGRMHGVKPANIVGAIANEAGLESRYIGRIDIRDDHSVLDLPAEMPHEILQHL KKVWVSGQQLQMRRIDTTETTAPAREFKSKPGGAGKFPPKPHHNKSTKPKPPYSG
Sequences:
>Translated_615_residues MLSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLN QVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELK TLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLH KLDALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQLKDGKLDILVATDVAARGLDV ERISHVLNYDIPYDVESYVHRIGRTGRAGRSGEAILFVTPREKGMLRQIERATHQPIEAMQLPSVDAVNDTRVTKFFGRI SNALVVGAEIDFYRKLLQRFESEHNVPAIEIAAALARLLQGDSPFLLSVPTRPQRERSELASEHHVKRPSSFKQTERPNN TEHPKRPQRNAPARNVPEFGMESYRIEVGRMHGVKPANIVGAIANEAGLESRYIGRIDIRDDHSVLDLPAEMPHEILQHL KKVWVSGQQLQMRRIDTTETTAPAREFKSKPGGAGKFPPKPHHNKSTKPKPPYSG >Mature_615_residues MLSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTRTVLN QVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELK TLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLH KLDALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQLKDGKLDILVATDVAARGLDV ERISHVLNYDIPYDVESYVHRIGRTGRAGRSGEAILFVTPREKGMLRQIERATHQPIEAMQLPSVDAVNDTRVTKFFGRI SNALVVGAEIDFYRKLLQRFESEHNVPAIEIAAALARLLQGDSPFLLSVPTRPQRERSELASEHHVKRPSSFKQTERPNN TEHPKRPQRNAPARNVPEFGMESYRIEVGRMHGVKPANIVGAIANEAGLESRYIGRIDIRDDHSVLDLPAEMPHEILQHL KKVWVSGQQLQMRRIDTTETTAPAREFKSKPGGAGKFPPKPHHNKSTKPKPPYSG
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=355, Percent_Identity=39.7183098591549, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI169881239, Length=376, Percent_Identity=39.6276595744681, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI13514809, Length=376, Percent_Identity=39.6276595744681, Blast_Score=269, Evalue=5e-72, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=39.5778364116095, Blast_Score=265, Evalue=8e-71, Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=37.8016085790885, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI301171475, Length=376, Percent_Identity=39.0957446808511, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI87196351, Length=376, Percent_Identity=39.0957446808511, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI301171467, Length=376, Percent_Identity=39.0957446808511, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI41327771, Length=392, Percent_Identity=39.030612244898, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI45446747, Length=427, Percent_Identity=36.2997658079625, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI45446743, Length=427, Percent_Identity=36.2997658079625, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI13129006, Length=450, Percent_Identity=37.3333333333333, Blast_Score=258, Evalue=2e-68, Organism=Homo sapiens, GI222352149, Length=360, Percent_Identity=39.1666666666667, Blast_Score=256, Evalue=5e-68, Organism=Homo sapiens, GI164664518, Length=354, Percent_Identity=34.7457627118644, Blast_Score=256, Evalue=6e-68, Organism=Homo sapiens, GI4503529, Length=387, Percent_Identity=39.5348837209302, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI83700235, Length=388, Percent_Identity=38.659793814433, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=38.8732394366197, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI188035877, Length=358, Percent_Identity=35.7541899441341, Blast_Score=245, Evalue=1e-64, Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=37.7892030848329, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=39.4886363636364, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=39.4886363636364, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=36.9747899159664, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI216548263, Length=368, Percent_Identity=34.7826086956522, Blast_Score=238, Evalue=2e-62, Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=37.3937677053824, Blast_Score=238, Evalue=2e-62, Organism=Homo sapiens, GI13518015, Length=368, Percent_Identity=34.7826086956522, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI262118318, Length=368, Percent_Identity=34.7826086956522, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI262231852, Length=368, Percent_Identity=34.7826086956522, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI21040371, Length=351, Percent_Identity=37.037037037037, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI4758112, Length=348, Percent_Identity=36.7816091954023, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI18375623, Length=348, Percent_Identity=36.7816091954023, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI55749865, Length=348, Percent_Identity=33.3333333333333, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI41327776, Length=355, Percent_Identity=36.056338028169, Blast_Score=230, Evalue=4e-60, Organism=Homo sapiens, GI31542656, Length=439, Percent_Identity=33.9407744874715, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=35.7142857142857, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=35.7142857142857, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI256223453, Length=389, Percent_Identity=31.8766066838046, Blast_Score=212, Evalue=8e-55, Organism=Homo sapiens, GI8922886, Length=402, Percent_Identity=33.0845771144279, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI6005743, Length=402, Percent_Identity=32.8358208955224, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI41327779, Length=377, Percent_Identity=31.2997347480106, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI13514831, Length=363, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI164419732, Length=401, Percent_Identity=33.1670822942643, Blast_Score=196, Evalue=7e-50, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=32.7027027027027, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI38327634, Length=371, Percent_Identity=32.3450134770889, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI38569503, Length=363, Percent_Identity=30.0275482093664, Blast_Score=185, Evalue=1e-46, Organism=Homo sapiens, GI38569505, Length=363, Percent_Identity=30.0275482093664, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.4712643678161, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=31.5789473684211, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=28.641975308642, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI256773275, Length=393, Percent_Identity=32.0610687022901, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=28.023598820059, Blast_Score=138, Evalue=1e-32, Organism=Homo sapiens, GI154759257, Length=427, Percent_Identity=28.1030444964871, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI20336298, Length=227, Percent_Identity=32.15859030837, Blast_Score=126, Evalue=7e-29, Organism=Homo sapiens, GI9966805, Length=347, Percent_Identity=27.6657060518732, Blast_Score=120, Evalue=5e-27, Organism=Escherichia coli, GI87082221, Length=563, Percent_Identity=50.7992895204263, Blast_Score=527, Evalue=1e-151, Organism=Escherichia coli, GI1787016, Length=376, Percent_Identity=42.5531914893617, Blast_Score=303, Evalue=2e-83, Organism=Escherichia coli, GI1787605, Length=338, Percent_Identity=43.491124260355, Blast_Score=282, Evalue=3e-77, Organism=Escherichia coli, GI1790214, Length=360, Percent_Identity=40.8333333333333, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1788930, Length=357, Percent_Identity=38.9355742296919, Blast_Score=231, Evalue=1e-61, Organism=Escherichia coli, GI48994977, Length=393, Percent_Identity=25.1908396946565, Blast_Score=93, Evalue=6e-20, Organism=Caenorhabditis elegans, GI71987143, Length=379, Percent_Identity=38.5224274406332, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=39.8936170212766, Blast_Score=272, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=39.8936170212766, Blast_Score=272, Evalue=4e-73, Organism=Caenorhabditis elegans, GI71995514, Length=376, Percent_Identity=39.8936170212766, Blast_Score=272, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17555296, Length=367, Percent_Identity=40.0544959128065, Blast_Score=266, Evalue=2e-71, Organism=Caenorhabditis elegans, GI71995724, Length=377, Percent_Identity=37.6657824933687, Blast_Score=261, Evalue=7e-70, Organism=Caenorhabditis elegans, GI17507121, Length=377, Percent_Identity=37.4005305039788, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=39.9470899470899, Blast_Score=257, Evalue=1e-68, Organism=Caenorhabditis elegans, GI17537549, Length=380, Percent_Identity=37.1052631578947, Blast_Score=255, Evalue=5e-68, Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=37.1352785145889, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17510559, Length=390, Percent_Identity=36.4102564102564, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI86570094, Length=383, Percent_Identity=37.0757180156658, Blast_Score=241, Evalue=8e-64, Organism=Caenorhabditis elegans, GI17552642, Length=359, Percent_Identity=37.6044568245125, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI17507945, Length=343, Percent_Identity=38.4839650145773, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=33.7874659400545, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI115533224, Length=363, Percent_Identity=37.1900826446281, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71982858, Length=351, Percent_Identity=35.042735042735, Blast_Score=228, Evalue=8e-60, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=36.0215053763441, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI17509811, Length=398, Percent_Identity=34.6733668341709, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=33.7837837837838, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17507879, Length=375, Percent_Identity=33.8666666666667, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71999646, Length=404, Percent_Identity=30.1980198019802, Blast_Score=201, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999644, Length=404, Percent_Identity=30.1980198019802, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI115532548, Length=406, Percent_Identity=29.5566502463054, Blast_Score=195, Evalue=5e-50, Organism=Caenorhabditis elegans, GI115532546, Length=388, Percent_Identity=30.1546391752577, Blast_Score=194, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17536099, Length=394, Percent_Identity=32.2335025380711, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17536101, Length=394, Percent_Identity=32.2335025380711, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17536103, Length=371, Percent_Identity=33.1536388140162, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI193206561, Length=343, Percent_Identity=31.1953352769679, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=31.3984168865435, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17505370, Length=479, Percent_Identity=29.6450939457203, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=30.1104972375691, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17508543, Length=385, Percent_Identity=29.6103896103896, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI25148203, Length=410, Percent_Identity=25.3658536585366, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71990816, Length=359, Percent_Identity=32.3119777158774, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=30.6122448979592, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=30.6068601583113, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17556951, Length=366, Percent_Identity=27.3224043715847, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=34.3137254901961, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI25148291, Length=430, Percent_Identity=27.2093023255814, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71997889, Length=391, Percent_Identity=26.5984654731458, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=24.3323442136499, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71987152, Length=102, Percent_Identity=44.1176470588235, Blast_Score=99, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17557982, Length=376, Percent_Identity=25, Blast_Score=93, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6324217, Length=388, Percent_Identity=40.2061855670103, Blast_Score=273, Evalue=8e-74, Organism=Saccharomyces cerevisiae, GI6321856, Length=356, Percent_Identity=41.8539325842697, Blast_Score=266, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6325138, Length=376, Percent_Identity=39.0957446808511, Blast_Score=266, Evalue=7e-72, Organism=Saccharomyces cerevisiae, GI6324778, Length=354, Percent_Identity=37.8531073446328, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=378, Percent_Identity=39.9470899470899, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=35.054347826087, Blast_Score=252, Evalue=1e-67, Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=34.8901098901099, Blast_Score=240, Evalue=5e-64, Organism=Saccharomyces cerevisiae, GI6323021, Length=373, Percent_Identity=37.8016085790885, Blast_Score=238, Evalue=3e-63, Organism=Saccharomyces cerevisiae, GI6322912, Length=380, Percent_Identity=37.1052631578947, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6322323, Length=380, Percent_Identity=37.1052631578947, Blast_Score=235, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6323947, Length=420, Percent_Identity=33.0952380952381, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6320449, Length=385, Percent_Identity=34.8051948051948, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6324620, Length=380, Percent_Identity=35.5263157894737, Blast_Score=218, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=34.8314606741573, Blast_Score=217, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6321963, Length=393, Percent_Identity=35.3689567430025, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6319714, Length=427, Percent_Identity=31.1475409836066, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321111, Length=375, Percent_Identity=32, Blast_Score=195, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6322427, Length=363, Percent_Identity=31.6804407713499, Blast_Score=193, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6320173, Length=412, Percent_Identity=31.7961165048544, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321267, Length=372, Percent_Identity=33.8709677419355, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6319618, Length=427, Percent_Identity=27.1662763466042, Blast_Score=159, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6322876, Length=440, Percent_Identity=29.7727272727273, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6323306, Length=411, Percent_Identity=27.2506082725061, Blast_Score=150, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6320400, Length=389, Percent_Identity=27.2493573264781, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=23.8505747126437, Blast_Score=104, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=421, Percent_Identity=23.5154394299287, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=41.2429378531073, Blast_Score=277, Evalue=2e-74, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=39.8860398860399, Blast_Score=277, Evalue=2e-74, Organism=Drosophila melanogaster, GI24585582, Length=357, Percent_Identity=39.4957983193277, Blast_Score=265, Evalue=7e-71, Organism=Drosophila melanogaster, GI24645031, Length=373, Percent_Identity=37.2654155495979, Blast_Score=261, Evalue=7e-70, Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=41.0764872521246, Blast_Score=261, Evalue=8e-70, Organism=Drosophila melanogaster, GI24662330, Length=393, Percent_Identity=38.1679389312977, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24642151, Length=366, Percent_Identity=37.7049180327869, Blast_Score=255, Evalue=6e-68, Organism=Drosophila melanogaster, GI17985987, Length=379, Percent_Identity=38.7862796833773, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24584994, Length=434, Percent_Identity=35.4838709677419, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI18857967, Length=383, Percent_Identity=37.3368146214099, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24582080, Length=381, Percent_Identity=37.2703412073491, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24582078, Length=381, Percent_Identity=37.2703412073491, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI17136248, Length=381, Percent_Identity=37.2703412073491, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24582075, Length=381, Percent_Identity=37.2703412073491, Blast_Score=246, Evalue=3e-65, Organism=Drosophila melanogaster, GI24644479, Length=355, Percent_Identity=38.0281690140845, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24644487, Length=356, Percent_Identity=37.9213483146067, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI45551833, Length=356, Percent_Identity=37.9213483146067, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24644485, Length=356, Percent_Identity=37.9213483146067, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI281361218, Length=356, Percent_Identity=37.9213483146067, Blast_Score=245, Evalue=7e-65, Organism=Drosophila melanogaster, GI24644481, Length=356, Percent_Identity=37.9213483146067, Blast_Score=245, Evalue=7e-65, Organism=Drosophila melanogaster, GI24644483, Length=356, Percent_Identity=37.9213483146067, Blast_Score=245, Evalue=8e-65, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=36.2359550561798, Blast_Score=242, Evalue=7e-64, Organism=Drosophila melanogaster, GI21356161, Length=375, Percent_Identity=36.8, Blast_Score=240, Evalue=3e-63, Organism=Drosophila melanogaster, GI24583281, Length=360, Percent_Identity=35, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24583279, Length=360, Percent_Identity=35, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24581954, Length=352, Percent_Identity=36.0795454545455, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24581952, Length=352, Percent_Identity=36.0795454545455, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI24581956, Length=352, Percent_Identity=36.0795454545455, Blast_Score=225, Evalue=6e-59, Organism=Drosophila melanogaster, GI17136814, Length=374, Percent_Identity=36.8983957219251, Blast_Score=217, Evalue=2e-56, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=39.7435897435897, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI28575014, Length=367, Percent_Identity=32.425068119891, Blast_Score=209, Evalue=6e-54, Organism=Drosophila melanogaster, GI28571808, Length=369, Percent_Identity=32.7913279132791, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI28571809, Length=369, Percent_Identity=32.7913279132791, Blast_Score=197, Evalue=2e-50, Organism=Drosophila melanogaster, GI21355559, Length=441, Percent_Identity=32.1995464852608, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI17647335, Length=377, Percent_Identity=29.7082228116711, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI28571338, Length=420, Percent_Identity=29.5238095238095, Blast_Score=179, Evalue=5e-45, Organism=Drosophila melanogaster, GI18859659, Length=420, Percent_Identity=29.5238095238095, Blast_Score=179, Evalue=6e-45, Organism=Drosophila melanogaster, GI24666101, Length=365, Percent_Identity=31.5068493150685, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI24643725, Length=400, Percent_Identity=28.75, Blast_Score=166, Evalue=5e-41, Organism=Drosophila melanogaster, GI24642822, Length=393, Percent_Identity=29.0076335877863, Blast_Score=162, Evalue=9e-40, Organism=Drosophila melanogaster, GI20130173, Length=501, Percent_Identity=25.748502994012, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI19920478, Length=366, Percent_Identity=29.2349726775956, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=29.0519877675841, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24640164, Length=371, Percent_Identity=26.9541778975741, Blast_Score=130, Evalue=4e-30, Organism=Drosophila melanogaster, GI17136666, Length=434, Percent_Identity=26.036866359447, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI24646066, Length=357, Percent_Identity=25.7703081232493, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 68071; Mature: 68071
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQ CCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCC TGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYG CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECC GQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVE CHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLH HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH KLDALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQL HHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH KDGKLDILVATDVAARGLDVERISHVLNYDIPYDVESYVHRIGRTGRAGRSGEAILFVTP CCCCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECC REKGMLRQIERATHQPIEAMQLPSVDAVNDTRVTKFFGRISNALVVGAEIDFYRKLLQRF CCCHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHH ESEHNVPAIEIAAALARLLQGDSPFLLSVPTRPQRERSELASEHHVKRPSSFKQTERPNN HHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCC TEHPKRPQRNAPARNVPEFGMESYRIEVGRMHGVKPANIVGAIANEAGLESRYIGRIDIR CCCCCCCCCCCCCCCCCCCCCHHHEEEEHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEC DDHSVLDLPAEMPHEILQHLKKVWVSGQQLQMRRIDTTETTAPAREFKSKPGGAGKFPPK CCCCEECCCCCCHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCC PHHNKSTKPKPPYSG CCCCCCCCCCCCCCC >Mature Secondary Structure MLSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQ CCCCCEECCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHCCCC TGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYG CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECC GQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIEDVE CHHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EVLRKLPASRQVALFSATMPPQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLH HHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHH KLDALTRILEVETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQL HHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH KDGKLDILVATDVAARGLDVERISHVLNYDIPYDVESYVHRIGRTGRAGRSGEAILFVTP CCCCEEEEEECCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECC REKGMLRQIERATHQPIEAMQLPSVDAVNDTRVTKFFGRISNALVVGAEIDFYRKLLQRF CCCHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHH ESEHNVPAIEIAAALARLLQGDSPFLLSVPTRPQRERSELASEHHVKRPSSFKQTERPNN HHHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCC TEHPKRPQRNAPARNVPEFGMESYRIEVGRMHGVKPANIVGAIANEAGLESRYIGRIDIR CCCCCCCCCCCCCCCCCCCCCHHHEEEEHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEC DDHSVLDLPAEMPHEILQHLKKVWVSGQQLQMRRIDTTETTAPAREFKSKPGGAGKFPPK CCCCEECCCCCCHHHHHHHHHHHHCCCCHHEEEECCCCCCCCCHHHHCCCCCCCCCCCCC PHHNKSTKPKPPYSG CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]