| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62185031
Identifier: 62185031
GI number: 62185031
Start: 459997
End: 461358
Strand: Direct
Name: 62185031
Synonym: CAB402
Alternate gene names: NA
Gene position: 459997-461358 (Clockwise)
Preceding gene: 62185029
Following gene: 62185035
Centisome position: 40.2
GC content: 42.22
Gene sequence:
>1362_bases ATGAAAAATATAATTAAAAATATAAATACGCAGTATTCTAGTGCTACCACTTCTGAGGAATCAAACGAAACTCCCAGTAA TGAGAATGAGGTTGTTGAAAATCATAACGCGATTCCCGATGAGAAGATTCTATTTTCTTGTGTTCATGGTGATAGCACAA GTAAGCATGTCACGCGTCAACCATGGAACGTTTCCAATCACAGAATTACCAACATCGTCAGAGGTGATAGTGACTCAGCC CCTGAGGGGAGTATTGCTTTAAAAAGTGATCTCAGTGATTACCTGCAAAAAGGAGACATCACTACCACGGGAATCTTTTT AAGAGACACCGGTGGATTAATGATCGGTGATATTGACATGGGATCTGCTTACACTGTATTGGGTCTACCTACTTCCTATA AAAACACGATCGTAGGTTCTGCGGATGCAGCGTCTGTTGGTATGGTAGAGGAGGATATAGGTACTCTTGCTCACAAGGTC ACCGATCTGATTAGTCGTATTAATCAACTCGTATCTGAAAATGGTTTGGATAAAATTATTAAAGACCTAGGCACACCGAC TCTTGGCGGGTCTGGAAAACCGCCTAATGTCACCCTGACAAAACCCAAGGAGGCTAAATGGTTAGTGCGTGATGGTGGGA ATTCTATGCAGGGAGATTTGGGATTTCAAAAAAGTGAACAAAGCTCACCAACGGCCCCAGAACCAACCATTACCAATCTT CCGATATCAGACAATCCAAAAAATAAAACAGCGGCTGCCCTAGGAGCGATTTCTACAGGTACTCCGAAGGATGATCTGCA AAGAATGGTTGCTGTAGATGATATAATCAAAACGGTGGAGAGTGTAAAAACTAACAATAATGCGTATCCGAATTGGTCGG GCATGGACATCCCATGTGTCTGTTTAAAACAGGGTGCTCCCAATGGATCGTCATCCGGAAATTATGATAAATCTAAAAAT TCTGAGTTATACATCCAGACTAAAGATGGAAATAGCGTGACGCTATTGCGTAGAGGCATCTACTGTGTTTCTTTTTGCTA TGACTTTACTCAGCCAGAACCTCCAGCCCCTCCTTCTCCTCCCACGCCTCCTGTTTCTCCAGATCCTTCTGCTCCTCCTA GGACTCCTGATGCTAAATCCGCAGAGGTCAGTTGCACATTATCCCTTAAACCTAAAGAAGGGGAGAAAAAAGAGTGTTAT AAAGTGACGGGGAAAGCGAGCTCTAGTTTGATAGGAAAGACTTATATTTTTGTTCCTGGTGATCAAGCATCAGTATCCAT AGATTTAAGTTTTGATGTTTCATCTAGTCCAGCCGTTGACAAACGTACTTGGACGATAACTTTTATAGGCGCTGCTTATT AA
Upstream 100 bases:
>100_bases TCGAGATTTTTATTATGAAATAATTTCTATACTTTAAAATAATATTTTATTCTATTTGGTATTTAAAATTGATCAATAGA AGTTTTGAATAAATTACAAA
Downstream 100 bases:
>100_bases ATTATGAACAAGGCTAAGTCATGCACTTAGCCTTATTTTAGCCACAGAAACTATGGATTAGTTTTTTGTGGGAAGATGGA AGGAAGCAAAGTCGTTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MKNIIKNINTQYSSATTSEESNETPSNENEVVENHNAIPDEKILFSCVHGDSTSKHVTRQPWNVSNHRITNIVRGDSDSA PEGSIALKSDLSDYLQKGDITTTGIFLRDTGGLMIGDIDMGSAYTVLGLPTSYKNTIVGSADAASVGMVEEDIGTLAHKV TDLISRINQLVSENGLDKIIKDLGTPTLGGSGKPPNVTLTKPKEAKWLVRDGGNSMQGDLGFQKSEQSSPTAPEPTITNL PISDNPKNKTAAALGAISTGTPKDDLQRMVAVDDIIKTVESVKTNNNAYPNWSGMDIPCVCLKQGAPNGSSSGNYDKSKN SELYIQTKDGNSVTLLRRGIYCVSFCYDFTQPEPPAPPSPPTPPVSPDPSAPPRTPDAKSAEVSCTLSLKPKEGEKKECY KVTGKASSSLIGKTYIFVPGDQASVSIDLSFDVSSSPAVDKRTWTITFIGAAY
Sequences:
>Translated_453_residues MKNIIKNINTQYSSATTSEESNETPSNENEVVENHNAIPDEKILFSCVHGDSTSKHVTRQPWNVSNHRITNIVRGDSDSA PEGSIALKSDLSDYLQKGDITTTGIFLRDTGGLMIGDIDMGSAYTVLGLPTSYKNTIVGSADAASVGMVEEDIGTLAHKV TDLISRINQLVSENGLDKIIKDLGTPTLGGSGKPPNVTLTKPKEAKWLVRDGGNSMQGDLGFQKSEQSSPTAPEPTITNL PISDNPKNKTAAALGAISTGTPKDDLQRMVAVDDIIKTVESVKTNNNAYPNWSGMDIPCVCLKQGAPNGSSSGNYDKSKN SELYIQTKDGNSVTLLRRGIYCVSFCYDFTQPEPPAPPSPPTPPVSPDPSAPPRTPDAKSAEVSCTLSLKPKEGEKKECY KVTGKASSSLIGKTYIFVPGDQASVSIDLSFDVSSSPAVDKRTWTITFIGAAY >Mature_453_residues MKNIIKNINTQYSSATTSEESNETPSNENEVVENHNAIPDEKILFSCVHGDSTSKHVTRQPWNVSNHRITNIVRGDSDSA PEGSIALKSDLSDYLQKGDITTTGIFLRDTGGLMIGDIDMGSAYTVLGLPTSYKNTIVGSADAASVGMVEEDIGTLAHKV TDLISRINQLVSENGLDKIIKDLGTPTLGGSGKPPNVTLTKPKEAKWLVRDGGNSMQGDLGFQKSEQSSPTAPEPTITNL PISDNPKNKTAAALGAISTGTPKDDLQRMVAVDDIIKTVESVKTNNNAYPNWSGMDIPCVCLKQGAPNGSSSGNYDKSKN SELYIQTKDGNSVTLLRRGIYCVSFCYDFTQPEPPAPPSPPTPPVSPDPSAPPRTPDAKSAEVSCTLSLKPKEGEKKECY KVTGKASSSLIGKTYIFVPGDQASVSIDLSFDVSSSPAVDKRTWTITFIGAAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48336; Mature: 48336
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIIKNINTQYSSATTSEESNETPSNENEVVENHNAIPDEKILFSCVHGDSTSKHVTRQ CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHEEEEEECCCCCCCCCCCC PWNVSNHRITNIVRGDSDSAPEGSIALKSDLSDYLQKGDITTTGIFLRDTGGLMIGDIDM CCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECC GSAYTVLGLPTSYKNTIVGSADAASVGMVEEDIGTLAHKVTDLISRINQLVSENGLDKII CCEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KDLGTPTLGGSGKPPNVTLTKPKEAKWLVRDGGNSMQGDLGFQKSEQSSPTAPEPTITNL HHHCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEC PISDNPKNKTAAALGAISTGTPKDDLQRMVAVDDIIKTVESVKTNNNAYPNWSGMDIPCV CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE CLKQGAPNGSSSGNYDKSKNSELYIQTKDGNSVTLLRRGIYCVSFCYDFTQPEPPAPPSP EEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHEEHHHHCCCCCCCCCCCC PTPPVSPDPSAPPRTPDAKSAEVSCTLSLKPKEGEKKECYKVTGKASSSLIGKTYIFVPG CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHEEECCCCCCCEECEEEEEECC DQASVSIDLSFDVSSSPAVDKRTWTITFIGAAY CCCEEEEEEEECCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKNIIKNINTQYSSATTSEESNETPSNENEVVENHNAIPDEKILFSCVHGDSTSKHVTRQ CCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHEEEEEECCCCCCCCCCCC PWNVSNHRITNIVRGDSDSAPEGSIALKSDLSDYLQKGDITTTGIFLRDTGGLMIGDIDM CCCCCCCEEEEEEECCCCCCCCCCEEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEECC GSAYTVLGLPTSYKNTIVGSADAASVGMVEEDIGTLAHKVTDLISRINQLVSENGLDKII CCEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KDLGTPTLGGSGKPPNVTLTKPKEAKWLVRDGGNSMQGDLGFQKSEQSSPTAPEPTITNL HHHCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEC PISDNPKNKTAAALGAISTGTPKDDLQRMVAVDDIIKTVESVKTNNNAYPNWSGMDIPCV CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE CLKQGAPNGSSSGNYDKSKNSELYIQTKDGNSVTLLRRGIYCVSFCYDFTQPEPPAPPSP EEECCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHHEEHHHHCCCCCCCCCCCC PTPPVSPDPSAPPRTPDAKSAEVSCTLSLKPKEGEKKECYKVTGKASSSLIGKTYIFVPG CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHEEECCCCCCCEECEEEEEECC DQASVSIDLSFDVSSSPAVDKRTWTITFIGAAY CCCEEEEEEEECCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA