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The map label for this gene is rsmI [H]

Identifier: 62185029

GI number: 62185029

Start: 458606

End: 459316

Strand: Direct

Name: rsmI [H]

Synonym: CAB400

Alternate gene names: 62185029

Gene position: 458606-459316 (Clockwise)

Preceding gene: 62185028

Following gene: 62185031

Centisome position: 40.07

GC content: 41.35

Gene sequence:

>711_bases
ATGACTTTATATATTTTCCCCAACACTTTAGGAAATCGACGCGTGGATCTTTTACCCGCGGGTATAGGTGAAGTTATACC
TAAGCTCCACGGTTTAATTGCCGAGAGTGATCGTGGTGGTCGTACCTTCCTGAATTTATGGAAAGTTCAAGAAACCCATA
AGTTTCCTATAGCAGTATTAAGTAAGAATGCACGGTCTGTAAAGGCTTGGGATTTTTACCTTGAGCCTATTGTAAAAAAA
CAAGAAAGCTGGGGATTAGTTTCTGATTCGGGGCTTCCTTGTATTGCCGATCCTGGAGCAGGACTGGTCCGTCGTGCTCG
TGCTCTGAATTTACCTATTCAAGCATTTTCTGGTCCGTGTTCTATAACATTAGCGTTAATGTTATCCGGATTGCCGGGGC
AAAACTTTACTTTTTTAGGTTATCTTCCGCAAAACCCTAGGGATAGAGAACGGTGTATAAGGAGTAGCTCCGGGAAACAA
CATACACAAATATGTATCGAAACACCCTACCGTAATGTCCATACATTTCAAGCATTATTAGAAGCTTTACCGGGTCATGC
TGATCTATGCGTAGGCATAGACCTGACTGGTGATCAAGAGTTTGTTTCTACACGATCTGTAGATATGTGGTTGCAATCTA
AGGATATCGATCAGGTAACTCAAAAAATTACAAAAACGCCTGCAATTTTTCTTTTCCATACTCCGAGATAA

Upstream 100 bases:

>100_bases
AAGCCTTGAGTTATTTATTTTATGCTGAGAGTATAATTAAGAATAATGCTCAAGATTCTATAATTGCTATGGAAACTTTG
CTGATTAGGATGACAAGTAT

Downstream 100 bases:

>100_bases
CTGATGGAGAAATAAAAAGAGGAATCTTTGTGCAAGATTCCTCAATACCTGTTTTCTACATATCTGTAAGATTGCTGCAG
CAGGAGTGCTCTGAGCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTLYIFPNTLGNRRVDLLPAGIGEVIPKLHGLIAESDRGGRTFLNLWKVQETHKFPIAVLSKNARSVKAWDFYLEPIVKK
QESWGLVSDSGLPCIADPGAGLVRRARALNLPIQAFSGPCSITLALMLSGLPGQNFTFLGYLPQNPRDRERCIRSSSGKQ
HTQICIETPYRNVHTFQALLEALPGHADLCVGIDLTGDQEFVSTRSVDMWLQSKDIDQVTQKITKTPAIFLFHTPR

Sequences:

>Translated_236_residues
MTLYIFPNTLGNRRVDLLPAGIGEVIPKLHGLIAESDRGGRTFLNLWKVQETHKFPIAVLSKNARSVKAWDFYLEPIVKK
QESWGLVSDSGLPCIADPGAGLVRRARALNLPIQAFSGPCSITLALMLSGLPGQNFTFLGYLPQNPRDRERCIRSSSGKQ
HTQICIETPYRNVHTFQALLEALPGHADLCVGIDLTGDQEFVSTRSVDMWLQSKDIDQVTQKITKTPAIFLFHTPR
>Mature_235_residues
TLYIFPNTLGNRRVDLLPAGIGEVIPKLHGLIAESDRGGRTFLNLWKVQETHKFPIAVLSKNARSVKAWDFYLEPIVKKQ
ESWGLVSDSGLPCIADPGAGLVRRARALNLPIQAFSGPCSITLALMLSGLPGQNFTFLGYLPQNPRDRERCIRSSSGKQH
TQICIETPYRNVHTFQALLEALPGHADLCVGIDLTGDQEFVSTRSVDMWLQSKDIDQVTQKITKTPAIFLFHTPR

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=181, Percent_Identity=26.5193370165746, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 26251; Mature: 26119

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLYIFPNTLGNRRVDLLPAGIGEVIPKLHGLIAESDRGGRTFLNLWKVQETHKFPIAVL
CEEEEECCCCCCCEEEEEECCHHHHHHHHHHHEECCCCCCHHHHHEEEHHCCCCCCEEEE
SKNARSVKAWDFYLEPIVKKQESWGLVSDSGLPCIADPGAGLVRRARALNLPIQAFSGPC
CCCCCCEEHHHHHHHHHHHHHHCCCEECCCCCCEEECCCHHHHHHHHHHCCCHHHCCCCH
SITLALMLSGLPGQNFTFLGYLPQNPRDRERCIRSSSGKQHTQICIETPYRNVHTFQALL
HEEHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
EALPGHADLCVGIDLTGDQEFVSTRSVDMWLQSKDIDQVTQKITKTPAIFLFHTPR
HHCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure 
TLYIFPNTLGNRRVDLLPAGIGEVIPKLHGLIAESDRGGRTFLNLWKVQETHKFPIAVL
EEEEECCCCCCCEEEEEECCHHHHHHHHHHHEECCCCCCHHHHHEEEHHCCCCCCEEEE
SKNARSVKAWDFYLEPIVKKQESWGLVSDSGLPCIADPGAGLVRRARALNLPIQAFSGPC
CCCCCCEEHHHHHHHHHHHHHHCCCEECCCCCCEEECCCHHHHHHHHHHCCCHHHCCCCH
SITLALMLSGLPGQNFTFLGYLPQNPRDRERCIRSSSGKQHTQICIETPYRNVHTFQALL
HEEHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHH
EALPGHADLCVGIDLTGDQEFVSTRSVDMWLQSKDIDQVTQKITKTPAIFLFHTPR
HHCCCCCCEEEEEEECCCHHHHHHCCCEEEECCCCHHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]