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The map label for this gene is ssb [H]

Identifier: 62185025

GI number: 62185025

Start: 454886

End: 455362

Strand: Direct

Name: ssb [H]

Synonym: CAB396

Alternate gene names: 62185025

Gene position: 454886-455362 (Clockwise)

Preceding gene: 62185024

Following gene: 62185026

Centisome position: 39.75

GC content: 38.99

Gene sequence:

>477_bases
ATGTTTGGTTATTTCGTCGGTTATTTAGGAGCAGATCCTGAAGAAAGAATGACTTCAAAAGGTAAACGTGTAGTTGTGTT
GCGTCTAGGTGTGAAATCTCGCGTAGGAACCAAAGATGAAACCGTGTGGTGCAAATGTAATATCTGGCATAACCGTTACG
ATAAAATGCTCCCTTATTTGAAAAAAGGATCAGGAGTCATTATTGCAGGGGATATTTCTGTAGAAAGTTACATGAGTAAG
GATGGCACCCCTCAATCTTCTTTGGTCATTAGTGTCGATACAATTAAGTTTAGTCCTTTTAGTAGAAGCGAAACTCGCTC
TCCAGCAACAGAGGAGAATGTATCTCATGTGTCTTATGACAATGTGTCTATAGGATTTGAGGGAGAGAGTTTGGATACTG
AAGCTATAGCAGATAAAGATATGTATGCTGGTTATGGTCAAGGTCAGCAATATATATCTGAAGATGTGCCTTTTTAG

Upstream 100 bases:

>100_bases
AGCTTATCTGATTTTCACAGTATTTACATAGCAACATAACCTCTGCTCGCTATAAGCAAGAGAGCGTGAGCTCTAAGGAA
ATTCAATAGGTGATTATATG

Downstream 100 bases:

>100_bases
TGGCTAACGAAATAACGATTTTTATAAAGAGGTAATTGTGGTTCTATTTCACTCTCAAGCATCTTGTAGTAAACGAGTTA
AGGCTGACGCGATTGTTCTT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MFGYFVGYLGADPEERMTSKGKRVVVLRLGVKSRVGTKDETVWCKCNIWHNRYDKMLPYLKKGSGVIIAGDISVESYMSK
DGTPQSSLVISVDTIKFSPFSRSETRSPATEENVSHVSYDNVSIGFEGESLDTEAIADKDMYAGYGQGQQYISEDVPF

Sequences:

>Translated_158_residues
MFGYFVGYLGADPEERMTSKGKRVVVLRLGVKSRVGTKDETVWCKCNIWHNRYDKMLPYLKKGSGVIIAGDISVESYMSK
DGTPQSSLVISVDTIKFSPFSRSETRSPATEENVSHVSYDNVSIGFEGESLDTEAIADKDMYAGYGQGQQYISEDVPF
>Mature_158_residues
MFGYFVGYLGADPEERMTSKGKRVVVLRLGVKSRVGTKDETVWCKCNIWHNRYDKMLPYLKKGSGVIIAGDISVESYMSK
DGTPQSSLVISVDTIKFSPFSRSETRSPATEENVSHVSYDNVSIGFEGESLDTEAIADKDMYAGYGQGQQYISEDVPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17576; Mature: 17576

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGYFVGYLGADPEERMTSKGKRVVVLRLGVKSRVGTKDETVWCKCNIWHNRYDKMLPYL
CCCEEEEECCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
KKGSGVIIAGDISVESYMSKDGTPQSSLVISVDTIKFSPFSRSETRSPATEENVSHVSYD
HCCCCEEEEECCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEC
NVSIGFEGESLDTEAIADKDMYAGYGQGQQYISEDVPF
CEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MFGYFVGYLGADPEERMTSKGKRVVVLRLGVKSRVGTKDETVWCKCNIWHNRYDKMLPYL
CCCEEEEECCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
KKGSGVIIAGDISVESYMSKDGTPQSSLVISVDTIKFSPFSRSETRSPATEENVSHVSYD
HCCCCEEEEECCCHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEC
NVSIGFEGESLDTEAIADKDMYAGYGQGQQYISEDVPF
CEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12682364 [H]