| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184998
Identifier: 62184998
GI number: 62184998
Start: 422353
End: 423537
Strand: Direct
Name: 62184998
Synonym: CAB366
Alternate gene names: NA
Gene position: 422353-423537 (Clockwise)
Preceding gene: 62184997
Following gene: 62184999
Centisome position: 36.91
GC content: 40.68
Gene sequence:
>1185_bases ATGGTGATGGGATCACAGCTAAGATTACAAGAATGTATCGAAGTGTTTCCCCACTCAAATTTTGACTTGCAGGTTAAACA GTTAATCTATGCTTGTCAGGATAAAAAACTTCGTAATTTCGTCTTTAAATTTTTTCGCTATCATCCTTTATTAAAGGTGC ATGACATTGCAAGAGCAGTTTACTTGCTTATTGCTTTGGAAGAGGGACAAGATTTGGGGTTGGACTTCTTGAAGTTAGAG CAAGAAGACTCGGGAGCTGCGCGTTTATTTGGTCGTGGAGGTTTCCCTTGGAAAGGACTTCCTTATCCCGGAGAACATGC AGAACTCGGCCTTTTGCTTTTGCAAATCTCCAGGTTTTATGATGACAGTTTGAAACAAGCTCAGATGATGGGTGAGTTTC AACAGGCGTTATTTATGCATGAGGCGACGATTTTCCCTGCTTTATGGAGTCAGGAACACGCTCGATCCATAAAAGAAAAA ACCTCGTTGAGTAAGTCTTTCCTATACCAGTTAGATCAACAGGTGACGAGTGAGTATACATTTACGGATCCGCATTTAGG TTTTTGGATGCAACGAACGCGGTCGGCATCCGCTTTTGTTTCTGGATCAGGATGTAAAAGTGGCGTGGGTGCTTACTATT CCGGAGATGTCGGTGTTGTCAACTACGGCCCATGTTATGGCGATATTAGTGATTGTCAGGGCTTTGGTCTATGTGGAACA GTTAAGGAATTCTCTTTTGCAGAAAATCCGGATACTACAGAAATTTCTTTTCTTTCGGCAGGGTCTGTTCCTTGTTCGAG AATTACAGGTTTTTCTTACTTACAAGATGCTTACCTAGGATCTAAAATTCGTCATCATATTACGATTTCTGAGAGACGGT GTCAGATATACTCTTTGATAGAAGATCCTTGCAAATCCACTTTTTCCATTTTTTGTAGGGGAAAAAGTTGTCAAGTGGTT GAAGGGCCGAGGTTACGGTCAAGCTCCTTAGATTCTTATAAAGGGCCGTCTAACGATGTCATTATTCATGGAGAGCGAGA CTCCTTACGCATCCTGTCTTCAAGTCTCTATATGGAAATTTTTTCTTTACAAGAAAAAGAAAGGTTTTGGGGAAGTAATT TTTTGATTAATATTCCCTATCAAGACGCCGAGGTCTCGGTTGTTTTTGAAAAATGCAATTTATAG
Upstream 100 bases:
>100_bases TTATCAGGGTCAAGTTTTTAGGATGTACTTAGAGGCTTGACTCTAAAGTTTTTTGTTATTATTGTCTGGGCGCAATCCGT TTTTGAGTAAGAAATTGTGA
Downstream 100 bases:
>100_bases TTTATTATTTTTTTTGAAAATAGAAGAGAAAGTAATCTTATAATTGTTTTTTAAGGATTATTTGTATTAAAATTATCCTT TTTGTAAGAGGAGAGAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MVMGSQLRLQECIEVFPHSNFDLQVKQLIYACQDKKLRNFVFKFFRYHPLLKVHDIARAVYLLIALEEGQDLGLDFLKLE QEDSGAARLFGRGGFPWKGLPYPGEHAELGLLLLQISRFYDDSLKQAQMMGEFQQALFMHEATIFPALWSQEHARSIKEK TSLSKSFLYQLDQQVTSEYTFTDPHLGFWMQRTRSASAFVSGSGCKSGVGAYYSGDVGVVNYGPCYGDISDCQGFGLCGT VKEFSFAENPDTTEISFLSAGSVPCSRITGFSYLQDAYLGSKIRHHITISERRCQIYSLIEDPCKSTFSIFCRGKSCQVV EGPRLRSSSLDSYKGPSNDVIIHGERDSLRILSSSLYMEIFSLQEKERFWGSNFLINIPYQDAEVSVVFEKCNL
Sequences:
>Translated_394_residues MVMGSQLRLQECIEVFPHSNFDLQVKQLIYACQDKKLRNFVFKFFRYHPLLKVHDIARAVYLLIALEEGQDLGLDFLKLE QEDSGAARLFGRGGFPWKGLPYPGEHAELGLLLLQISRFYDDSLKQAQMMGEFQQALFMHEATIFPALWSQEHARSIKEK TSLSKSFLYQLDQQVTSEYTFTDPHLGFWMQRTRSASAFVSGSGCKSGVGAYYSGDVGVVNYGPCYGDISDCQGFGLCGT VKEFSFAENPDTTEISFLSAGSVPCSRITGFSYLQDAYLGSKIRHHITISERRCQIYSLIEDPCKSTFSIFCRGKSCQVV EGPRLRSSSLDSYKGPSNDVIIHGERDSLRILSSSLYMEIFSLQEKERFWGSNFLINIPYQDAEVSVVFEKCNL >Mature_394_residues MVMGSQLRLQECIEVFPHSNFDLQVKQLIYACQDKKLRNFVFKFFRYHPLLKVHDIARAVYLLIALEEGQDLGLDFLKLE QEDSGAARLFGRGGFPWKGLPYPGEHAELGLLLLQISRFYDDSLKQAQMMGEFQQALFMHEATIFPALWSQEHARSIKEK TSLSKSFLYQLDQQVTSEYTFTDPHLGFWMQRTRSASAFVSGSGCKSGVGAYYSGDVGVVNYGPCYGDISDCQGFGLCGT VKEFSFAENPDTTEISFLSAGSVPCSRITGFSYLQDAYLGSKIRHHITISERRCQIYSLIEDPCKSTFSIFCRGKSCQVV EGPRLRSSSLDSYKGPSNDVIIHGERDSLRILSSSLYMEIFSLQEKERFWGSNFLINIPYQDAEVSVVFEKCNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44595; Mature: 44595
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMGSQLRLQECIEVFPHSNFDLQVKQLIYACQDKKLRNFVFKFFRYHPLLKVHDIARAV CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH YLLIALEEGQDLGLDFLKLEQEDSGAARLFGRGGFPWKGLPYPGEHAELGLLLLQISRFY HHEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH DDSLKQAQMMGEFQQALFMHEATIFPALWSQEHARSIKEKTSLSKSFLYQLDQQVTSEYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FTDPHLGFWMQRTRSASAFVSGSGCKSGVGAYYSGDVGVVNYGPCYGDISDCQGFGLCGT CCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEECCCCCCCHHHCCCCCCCCC VKEFSFAENPDTTEISFLSAGSVPCSRITGFSYLQDAYLGSKIRHHITISERRCQIYSLI HHHCCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHH EDPCKSTFSIFCRGKSCQVVEGPRLRSSSLDSYKGPSNDVIIHGERDSLRILSSSLYMEI HHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH FSLQEKERFWGSNFLINIPYQDAEVSVVFEKCNL HHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCC >Mature Secondary Structure MVMGSQLRLQECIEVFPHSNFDLQVKQLIYACQDKKLRNFVFKFFRYHPLLKVHDIARAV CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH YLLIALEEGQDLGLDFLKLEQEDSGAARLFGRGGFPWKGLPYPGEHAELGLLLLQISRFY HHEEEEECCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH DDSLKQAQMMGEFQQALFMHEATIFPALWSQEHARSIKEKTSLSKSFLYQLDQQVTSEYT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC FTDPHLGFWMQRTRSASAFVSGSGCKSGVGAYYSGDVGVVNYGPCYGDISDCQGFGLCGT CCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCEEECCCCCCCHHHCCCCCCCCC VKEFSFAENPDTTEISFLSAGSVPCSRITGFSYLQDAYLGSKIRHHITISERRCQIYSLI HHHCCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHEEEEECHHHHHHHHHH EDPCKSTFSIFCRGKSCQVVEGPRLRSSSLDSYKGPSNDVIIHGERDSLRILSSSLYMEI HHHHHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH FSLQEKERFWGSNFLINIPYQDAEVSVVFEKCNL HHHHHHHHHCCCCCEEECCCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA