| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184980
Identifier: 62184980
GI number: 62184980
Start: 404474
End: 406546
Strand: Direct
Name: 62184980
Synonym: CAB349
Alternate gene names: NA
Gene position: 404474-406546 (Clockwise)
Preceding gene: 62184979
Following gene: 62184981
Centisome position: 35.34
GC content: 39.27
Gene sequence:
>2073_bases GTGGCTTTGCTAGCGTTCTTTTATAAGCATCAGAAAAAATTCATGGGTTTTGTCATTGTTGGCGTATGCGTATCAGGTAT AGGTATAGGCTGGGGACGCTATCCAGGAGAATCTTCCCGTGGCTCTAAGAAAATTGTTTTTTCTGTTCCGGGTAAAAAAT ATTCTGAGAGAGAATTTTTAGCTTTTAAGAGATTCTTCACCAACGAAGCTTATCCTTTCACTGGGAATCCTCAAGCGTGG AACTTCTTAAATGAAGGTTTATTAACAGAGCGCTTTCTAACGAATAAGTTAGGGGAAAAGCTGTTCTTAAAAGTATATTC TCAAGACTATCCCGCCTTTAAAAAAGAAAAAAACTATCAGTCATATCGGCGATTTGACTCTCTTTTTATTTCTTCCGAAG AGGTATGGAAATCCTCAGCACCACGTTTATATCAAGCTTTGGTCGCTTTGCAGGAAATCCATGATCCTGTATCTCCTGAG GGCTTTGTCGCTAGGGTTCAGCTATTTTTAGAAGAAAAAAAATTCCCTCATTATATTCTTAAACAAATGCTTGAATATCG TAGGCAGATGTTTAATCTTCCTCAAGATCCTGTTTTAGCTCAGGGCAAGGATCTACATTTATTTGGTTATCGAAACATTG CGGATTGGTTTGGTGATGCGTACGTTTCTGCGGCTGTTGAAGCTTTATTGCGTTTTGTCAATGAGCAGAAAAAAAATGTC GCCATGCCTTCCTTAAAAGAAGCTCAACAAGATTTTCAAGACAAAGCCAAACAAGCTTTTACGAAGTTAAGTAAACACGC TGGCCTGACTTTAAGCTTTGATCAGTTTGTTGCTTCTTATTTTGATTTTATGGGAGTCAGCGAATCAGAATTTTTCAATA TATATCGCGAGATTCTGTTATGTAAGAGGGCTTTCTTACAATTAGAAGGTAGCGTAACTTTTGATTATCGTCCTTTGCAA GAGTTCTTCTCCATGGGCAAAGACTCTACGTCTGTAGAAATGGTAAAACTTCCTCGTGAATATCAATTTAAGAACAAAGA GGATTTAGAAGCTTTTGAAGTATACATTAGTCTTGTGGGCGAGCCTATAAAGGATTGTCTTAGTGTTCCGCGGTGTACTT TGCCTATAAAAACTATAAAAGCTAAAGAACCCAGGTTAGTAGGACGAAGGTTTTTAGTTTCGTACAAGAGCGTGAAACTT CAGGATTTAGAAACGAAAGTTCCTATGGTGGAGGTGCACCAATGGCAGCAAAATCCTGAAAATTTCCAAGTGCTACTCCA ACAGTTCCCTAAAATTGAAACATGTAATTCGAGCAAGGATTTCCAAACTCTTAAACCTTCCCTTGTAGAAAAGATCTATT CTTTCACCAGGAAAGAGATATTACGATCTTCTCCGAAAAGAATCCTGGAGGGGTTAGCTCAATGTGAACAGAAAAGTCAT GAAGTTTTCCTCTCTGCACGGAAAGATAGTGTCTTAGAAGGGATCCTAGATGGGAATGAGTTGGCCAAGTTGTTGTTAGA TAATGAGGTGTTAGAAGCCTATAGTCAGGACGGCGAACATTATTATACTTTTGTAGTTGATACATGCTTTGAAGGGGAAG AAGTGATTCCTTATCGTGAAGTTTTGCGTAAAGGTCTGGCCAAAACCTTAGTTTCCTCTCATAAAAATATTGCGCATATA GATAGAGTGGTGGCTGCTTTAAAATCACGGTATCAAGAAGAAGAGAACAGTAATTTATGGCAAAAGCGGCTGTGGTTGCT CGTCGAGGAACATAGAGAGGGCACATACCAGCCGGGCGCTCTTTCCTGGAATCTGGAAAAATCTATCAAAGTATTTACTC GTGGGGATCAAAATATTCCTCAGCCCTATCCTGTCTTAGCTTCTATGGAGGAGGGGGCATTGTCCGGTGTGGAGTTTAAC CCTGACGAAGGCCCATTTTTCTATAAATGTTTATCTCATCAGACATGTATGGAGCCCACGAGCGTGGAAAAGTTGTTCCT TACTAAAAACCATTTAAACGAAGAAATCCTTGGTAGTTATATAGAACATTTCATTGATGAAGGAGTCAGATAA
Upstream 100 bases:
>100_bases TGGGAAAAGAGCCCTTCTCTTTTCTGGTTCTCAGGGGATCCTTCTTGGTTTTTTCCGATCAATAGTTTACACTAAGTTTT TTATTGTTTATTCCAAGAGG
Downstream 100 bases:
>100_bases TGTGGTATTCTGATTATCATGTGTGGATCGACCCCATACACGAGAATATTGTACGTTTAGGATTGACGTCTAGGATGCGA GAAAATCTGGGGCAAATCCT
Product: putative inner membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MALLAFFYKHQKKFMGFVIVGVCVSGIGIGWGRYPGESSRGSKKIVFSVPGKKYSEREFLAFKRFFTNEAYPFTGNPQAW NFLNEGLLTERFLTNKLGEKLFLKVYSQDYPAFKKEKNYQSYRRFDSLFISSEEVWKSSAPRLYQALVALQEIHDPVSPE GFVARVQLFLEEKKFPHYILKQMLEYRRQMFNLPQDPVLAQGKDLHLFGYRNIADWFGDAYVSAAVEALLRFVNEQKKNV AMPSLKEAQQDFQDKAKQAFTKLSKHAGLTLSFDQFVASYFDFMGVSESEFFNIYREILLCKRAFLQLEGSVTFDYRPLQ EFFSMGKDSTSVEMVKLPREYQFKNKEDLEAFEVYISLVGEPIKDCLSVPRCTLPIKTIKAKEPRLVGRRFLVSYKSVKL QDLETKVPMVEVHQWQQNPENFQVLLQQFPKIETCNSSKDFQTLKPSLVEKIYSFTRKEILRSSPKRILEGLAQCEQKSH EVFLSARKDSVLEGILDGNELAKLLLDNEVLEAYSQDGEHYYTFVVDTCFEGEEVIPYREVLRKGLAKTLVSSHKNIAHI DRVVAALKSRYQEEENSNLWQKRLWLLVEEHREGTYQPGALSWNLEKSIKVFTRGDQNIPQPYPVLASMEEGALSGVEFN PDEGPFFYKCLSHQTCMEPTSVEKLFLTKNHLNEEILGSYIEHFIDEGVR
Sequences:
>Translated_690_residues MALLAFFYKHQKKFMGFVIVGVCVSGIGIGWGRYPGESSRGSKKIVFSVPGKKYSEREFLAFKRFFTNEAYPFTGNPQAW NFLNEGLLTERFLTNKLGEKLFLKVYSQDYPAFKKEKNYQSYRRFDSLFISSEEVWKSSAPRLYQALVALQEIHDPVSPE GFVARVQLFLEEKKFPHYILKQMLEYRRQMFNLPQDPVLAQGKDLHLFGYRNIADWFGDAYVSAAVEALLRFVNEQKKNV AMPSLKEAQQDFQDKAKQAFTKLSKHAGLTLSFDQFVASYFDFMGVSESEFFNIYREILLCKRAFLQLEGSVTFDYRPLQ EFFSMGKDSTSVEMVKLPREYQFKNKEDLEAFEVYISLVGEPIKDCLSVPRCTLPIKTIKAKEPRLVGRRFLVSYKSVKL QDLETKVPMVEVHQWQQNPENFQVLLQQFPKIETCNSSKDFQTLKPSLVEKIYSFTRKEILRSSPKRILEGLAQCEQKSH EVFLSARKDSVLEGILDGNELAKLLLDNEVLEAYSQDGEHYYTFVVDTCFEGEEVIPYREVLRKGLAKTLVSSHKNIAHI DRVVAALKSRYQEEENSNLWQKRLWLLVEEHREGTYQPGALSWNLEKSIKVFTRGDQNIPQPYPVLASMEEGALSGVEFN PDEGPFFYKCLSHQTCMEPTSVEKLFLTKNHLNEEILGSYIEHFIDEGVR >Mature_689_residues ALLAFFYKHQKKFMGFVIVGVCVSGIGIGWGRYPGESSRGSKKIVFSVPGKKYSEREFLAFKRFFTNEAYPFTGNPQAWN FLNEGLLTERFLTNKLGEKLFLKVYSQDYPAFKKEKNYQSYRRFDSLFISSEEVWKSSAPRLYQALVALQEIHDPVSPEG FVARVQLFLEEKKFPHYILKQMLEYRRQMFNLPQDPVLAQGKDLHLFGYRNIADWFGDAYVSAAVEALLRFVNEQKKNVA MPSLKEAQQDFQDKAKQAFTKLSKHAGLTLSFDQFVASYFDFMGVSESEFFNIYREILLCKRAFLQLEGSVTFDYRPLQE FFSMGKDSTSVEMVKLPREYQFKNKEDLEAFEVYISLVGEPIKDCLSVPRCTLPIKTIKAKEPRLVGRRFLVSYKSVKLQ DLETKVPMVEVHQWQQNPENFQVLLQQFPKIETCNSSKDFQTLKPSLVEKIYSFTRKEILRSSPKRILEGLAQCEQKSHE VFLSARKDSVLEGILDGNELAKLLLDNEVLEAYSQDGEHYYTFVVDTCFEGEEVIPYREVLRKGLAKTLVSSHKNIAHID RVVAALKSRYQEEENSNLWQKRLWLLVEEHREGTYQPGALSWNLEKSIKVFTRGDQNIPQPYPVLASMEEGALSGVEFNP DEGPFFYKCLSHQTCMEPTSVEKLFLTKNHLNEEILGSYIEHFIDEGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79964; Mature: 79833
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLAFFYKHQKKFMGFVIVGVCVSGIGIGWGRYPGESSRGSKKIVFSVPGKKYSEREFL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH AFKRFFTNEAYPFTGNPQAWNFLNEGLLTERFLTNKLGEKLFLKVYSQDYPAFKKEKNYQ HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH SYRRFDSLFISSEEVWKSSAPRLYQALVALQEIHDPVSPEGFVARVQLFLEEKKFPHYIL HHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH KQMLEYRRQMFNLPQDPVLAQGKDLHLFGYRNIADWFGDAYVSAAVEALLRFVNEQKKNV HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AMPSLKEAQQDFQDKAKQAFTKLSKHAGLTLSFDQFVASYFDFMGVSESEFFNIYREILL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHH CKRAFLQLEGSVTFDYRPLQEFFSMGKDSTSVEMVKLPREYQFKNKEDLEAFEVYISLVG HHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCHHEECCHHHCCCCCCHHHHHHHHHHHHC EPIKDCLSVPRCTLPIKTIKAKEPRLVGRRFLVSYKSVKLQDLETKVPMVEVHQWQQNPE HHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCHH NFQVLLQQFPKIETCNSSKDFQTLKPSLVEKIYSFTRKEILRSSPKRILEGLAQCEQKSH HHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EVFLSARKDSVLEGILDGNELAKLLLDNEVLEAYSQDGEHYYTFVVDTCFEGEEVIPYRE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHH VLRKGLAKTLVSSHKNIAHIDRVVAALKSRYQEEENSNLWQKRLWLLVEEHREGTYQPGA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC LSWNLEKSIKVFTRGDQNIPQPYPVLASMEEGALSGVEFNPDEGPFFYKCLSHQTCMEPT EEECHHHCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC SVEKLFLTKNHLNEEILGSYIEHFIDEGVR HHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure ALLAFFYKHQKKFMGFVIVGVCVSGIGIGWGRYPGESSRGSKKIVFSVPGKKYSEREFL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH AFKRFFTNEAYPFTGNPQAWNFLNEGLLTERFLTNKLGEKLFLKVYSQDYPAFKKEKNYQ HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHH SYRRFDSLFISSEEVWKSSAPRLYQALVALQEIHDPVSPEGFVARVQLFLEEKKFPHYIL HHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH KQMLEYRRQMFNLPQDPVLAQGKDLHLFGYRNIADWFGDAYVSAAVEALLRFVNEQKKNV HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AMPSLKEAQQDFQDKAKQAFTKLSKHAGLTLSFDQFVASYFDFMGVSESEFFNIYREILL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHH CKRAFLQLEGSVTFDYRPLQEFFSMGKDSTSVEMVKLPREYQFKNKEDLEAFEVYISLVG HHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCHHEECCHHHCCCCCCHHHHHHHHHHHHC EPIKDCLSVPRCTLPIKTIKAKEPRLVGRRFLVSYKSVKLQDLETKVPMVEVHQWQQNPE HHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHCCHH NFQVLLQQFPKIETCNSSKDFQTLKPSLVEKIYSFTRKEILRSSPKRILEGLAQCEQKSH HHHHHHHHCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH EVFLSARKDSVLEGILDGNELAKLLLDNEVLEAYSQDGEHYYTFVVDTCFEGEEVIPYRE HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHH VLRKGLAKTLVSSHKNIAHIDRVVAALKSRYQEEENSNLWQKRLWLLVEEHREGTYQPGA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC LSWNLEKSIKVFTRGDQNIPQPYPVLASMEEGALSGVEFNPDEGPFFYKCLSHQTCMEPT EEECHHHCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC SVEKLFLTKNHLNEEILGSYIEHFIDEGVR HHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA