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The map label for this gene is 62184891

Identifier: 62184891

GI number: 62184891

Start: 271285

End: 272154

Strand: Direct

Name: 62184891

Synonym: CAB249

Alternate gene names: NA

Gene position: 271285-272154 (Clockwise)

Preceding gene: 62184889

Following gene: 62184892

Centisome position: 23.71

GC content: 41.84

Gene sequence:

>870_bases
ATGCGAATTCCAAGAAGCGTTGGTACACACGACGGTTCTTTTCATGCTGATGAGGTTACGGCGTGTGCTTTACTTATTTT
GTTCGACCTTGTTGATGAAGATAAGATCGTCCGTACGCGAAATCCTGAAAAGCTCGCCGAGTGCGAATATGTATGTGATG
TCGGTGGAGTCTATTCTCCAGAGCAAAAAAGATTCGATCATCACCAGGTAGCCTATGAAGGACCCTGGAGTAGCGCAGGA
ATGGTATTGGATTATCTTAGGGAACAACGACTTATCGATCTAGAAGAATATCATTTTCTAAATCATACGTTAATTCATGG
TATCGATGAACAAGATAATGGAAGGTTTTTTTCGAAAGAAGGCTTTTGTTCTTTTTCTGATATCATTAAAATCTACAATC
CTGAAGAAGGGAGAAATGCTTCGGATGCGGATTTCTTTTTCTCTTTAAAATTTACGATCGACTTATTGAAGCGTTTGAGA
AATAAGTTTCGCTACGATCGCATGTGTAGAGATGTTGTCCGATCTGCCATGGAAAAAGATGAATTTTGTTTATTTTTTGA
TCGTCCGTTGGCATGGCAAGAAAATTTCTTTTTTTTAGGTGGCGAGCAACACCCTGCAGCATTTGTGTGTTTCCCTGCTT
GTGATCAATGGATTCTTAGGGGAATCCCTCCCACTTTAGATAGGCGCATGGAAGTGCGTGTGCCCTTCCCAGAAAGTTGG
GCAGGACTTCTGGGCAAAGAGCTCGAAGAAATCAGTGGTATTCCTGGAGCCATTTTTTGCCATAAGGGATTGTTTTTGTC
TGTTTGGGATAGCAAAGAACACTGTCGGCGCGCCTTGCAGTTGGTGTTAGAAAATCGAGGATTAGTATGA

Upstream 100 bases:

>100_bases
AGATGAAAAAGATTTTTAAGAAAATGCAAAGAAATGTCTTTGCGATTGAGAATTATTTTTCTCTGGATACAATGGAGGGT
TTTTAAGAAGGATGGGAAAT

Downstream 100 bases:

>100_bases
CCATTTTTGAAAAGATTATCGAAGGCGCGATAGATTGCGAAAAAGTTTTTGAAAATGAGAATTTTATCGCTATAAAAGAT
CGTTTCCCCCAGGCTCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MRIPRSVGTHDGSFHADEVTACALLILFDLVDEDKIVRTRNPEKLAECEYVCDVGGVYSPEQKRFDHHQVAYEGPWSSAG
MVLDYLREQRLIDLEEYHFLNHTLIHGIDEQDNGRFFSKEGFCSFSDIIKIYNPEEGRNASDADFFFSLKFTIDLLKRLR
NKFRYDRMCRDVVRSAMEKDEFCLFFDRPLAWQENFFFLGGEQHPAAFVCFPACDQWILRGIPPTLDRRMEVRVPFPESW
AGLLGKELEEISGIPGAIFCHKGLFLSVWDSKEHCRRALQLVLENRGLV

Sequences:

>Translated_289_residues
MRIPRSVGTHDGSFHADEVTACALLILFDLVDEDKIVRTRNPEKLAECEYVCDVGGVYSPEQKRFDHHQVAYEGPWSSAG
MVLDYLREQRLIDLEEYHFLNHTLIHGIDEQDNGRFFSKEGFCSFSDIIKIYNPEEGRNASDADFFFSLKFTIDLLKRLR
NKFRYDRMCRDVVRSAMEKDEFCLFFDRPLAWQENFFFLGGEQHPAAFVCFPACDQWILRGIPPTLDRRMEVRVPFPESW
AGLLGKELEEISGIPGAIFCHKGLFLSVWDSKEHCRRALQLVLENRGLV
>Mature_289_residues
MRIPRSVGTHDGSFHADEVTACALLILFDLVDEDKIVRTRNPEKLAECEYVCDVGGVYSPEQKRFDHHQVAYEGPWSSAG
MVLDYLREQRLIDLEEYHFLNHTLIHGIDEQDNGRFFSKEGFCSFSDIIKIYNPEEGRNASDADFFFSLKFTIDLLKRLR
NKFRYDRMCRDVVRSAMEKDEFCLFFDRPLAWQENFFFLGGEQHPAAFVCFPACDQWILRGIPPTLDRRMEVRVPFPESW
AGLLGKELEEISGIPGAIFCHKGLFLSVWDSKEHCRRALQLVLENRGLV

Specific function: Unknown

COG id: COG4286

COG function: function code S; Uncharacterized conserved protein related to MYG1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0160 (MYG1) family [H]

Homologues:

Organism=Homo sapiens, GI145275185, Length=335, Percent_Identity=30.4477611940298, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25150283, Length=329, Percent_Identity=27.355623100304, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24645226, Length=329, Percent_Identity=25.2279635258359, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45551849, Length=329, Percent_Identity=25.2279635258359, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24645224, Length=329, Percent_Identity=25.2279635258359, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003226 [H]

Pfam domain/function: PF03690 UPF0160 [H]

EC number: NA

Molecular weight: Translated: 33572; Mature: 33572

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPRSVGTHDGSFHADEVTACALLILFDLVDEDKIVRTRNPEKLAECEYVCDVGGVYSP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCC
EQKRFDHHQVAYEGPWSSAGMVLDYLREQRLIDLEEYHFLNHTLIHGIDEQDNGRFFSKE
HHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCC
GFCSFSDIIKIYNPEEGRNASDADFFFSLKFTIDLLKRLRNKFRYDRMCRDVVRSAMEKD
CCCCHHHHHEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EFCLFFDRPLAWQENFFFLGGEQHPAAFVCFPACDQWILRGIPPTLDRRMEVRVPFPESW
CEEEEECCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHCCCCCCCCCCEEEECCCCHHH
AGLLGKELEEISGIPGAIFCHKGLFLSVWDSKEHCRRALQLVLENRGLV
HHHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRIPRSVGTHDGSFHADEVTACALLILFDLVDEDKIVRTRNPEKLAECEYVCDVGGVYSP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCCCCC
EQKRFDHHQVAYEGPWSSAGMVLDYLREQRLIDLEEYHFLNHTLIHGIDEQDNGRFFSKE
HHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEECCC
GFCSFSDIIKIYNPEEGRNASDADFFFSLKFTIDLLKRLRNKFRYDRMCRDVVRSAMEKD
CCCCHHHHHEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EFCLFFDRPLAWQENFFFLGGEQHPAAFVCFPACDQWILRGIPPTLDRRMEVRVPFPESW
CEEEEECCCCCCCCCEEEECCCCCCCEEEECCHHHHHHHCCCCCCCCCCEEEECCCCHHH
AGLLGKELEEISGIPGAIFCHKGLFLSVWDSKEHCRRALQLVLENRGLV
HHHHHHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]