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The map label for this gene is ycfF [C]

Identifier: 62184892

GI number: 62184892

Start: 272151

End: 272483

Strand: Direct

Name: ycfF [C]

Synonym: CAB250

Alternate gene names: 62184892

Gene position: 272151-272483 (Clockwise)

Preceding gene: 62184891

Following gene: 62184893

Centisome position: 23.78

GC content: 37.24

Gene sequence:

>333_bases
ATGACCATTTTTGAAAAGATTATCGAAGGCGCGATAGATTGCGAAAAAGTTTTTGAAAATGAGAATTTTATCGCTATAAA
AGATCGTTTCCCCCAGGCTCCTGTTCATCTCTTGATTATTCCTAAAAAGCACATAGAAAAATTACAAGATATGCAGGATG
AGGATTTTTCTTTACTTGCTGAAGCAGGAAAAATTATTCAGCAATTAGCGGAAGCTTTTGGTATTGCTGAGGGATATCGT
GTTGTAATCAATAATGGTGTTGACGGGGGACAGAGCGTATTCCATTTACATATTCATCTTTTAGGTGGAAGCTCTTTGGG
GGCTATTGCCTAA

Upstream 100 bases:

>100_bases
GAGCCATTTTTTGCCATAAGGGATTGTTTTTGTCTGTTTGGGATAGCAAAGAACACTGTCGGCGCGCCTTGCAGTTGGTG
TTAGAAAATCGAGGATTAGT

Downstream 100 bases:

>100_bases
TTTTTTTTTACTCTTTCGCTCATGTAGCTCATGGATCGCAATCTTTGCGTCAGCATTTGCTTATTGGTGATTTCCCTCGA
GCTATTCAGGAAGCTCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTIFEKIIEGAIDCEKVFENENFIAIKDRFPQAPVHLLIIPKKHIEKLQDMQDEDFSLLAEAGKIIQQLAEAFGIAEGYR
VVINNGVDGGQSVFHLHIHLLGGSSLGAIA

Sequences:

>Translated_110_residues
MTIFEKIIEGAIDCEKVFENENFIAIKDRFPQAPVHLLIIPKKHIEKLQDMQDEDFSLLAEAGKIIQQLAEAFGIAEGYR
VVINNGVDGGQSVFHLHIHLLGGSSLGAIA
>Mature_109_residues
TIFEKIIEGAIDCEKVFENENFIAIKDRFPQAPVHLLIIPKKHIEKLQDMQDEDFSLLAEAGKIIQQLAEAFGIAEGYRV
VINNGVDGGQSVFHLHIHLLGGSSLGAIA

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=105, Percent_Identity=45.7142857142857, Blast_Score=102, Evalue=7e-23,
Organism=Homo sapiens, GI14211923, Length=105, Percent_Identity=43.8095238095238, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=42.2018348623853, Blast_Score=76, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17506713, Length=105, Percent_Identity=46.6666666666667, Blast_Score=106, Evalue=3e-24,
Organism=Drosophila melanogaster, GI28574010, Length=105, Percent_Identity=45.7142857142857, Blast_Score=101, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24581222, Length=105, Percent_Identity=45.7142857142857, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12125; Mature: 11994

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIFEKIIEGAIDCEKVFENENFIAIKDRFPQAPVHLLIIPKKHIEKLQDMQDEDFSLLA
CCHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHH
EAGKIIQQLAEAFGIAEGYRVVINNGVDGGQSVFHLHIHLLGGSSLGAIA
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
TIFEKIIEGAIDCEKVFENENFIAIKDRFPQAPVHLLIIPKKHIEKLQDMQDEDFSLLA
CHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHH
EAGKIIQQLAEAFGIAEGYRVVINNGVDGGQSVFHLHIHLLGGSSLGAIA
HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]