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The map label for this gene is cmcB [H]

Identifier: 62184825

GI number: 62184825

Start: 199087

End: 200760

Strand: Direct

Name: cmcB [H]

Synonym: CAB181

Alternate gene names: 62184825

Gene position: 199087-200760 (Clockwise)

Preceding gene: 62184824

Following gene: 62184826

Centisome position: 17.4

GC content: 42.41

Gene sequence:

>1674_bases
ATGTCCAAACTCATCAGACGAGTAGTTACGGTCCTCGCGCTAACTAGTATGGCGAGTTCATTTGCCAGCGGGAAGATAGA
GGCCGCTGCTGCAGAGTCTCTTGCTACAAGATTCATTGCCAGTACCGAAAACTCAAATGACAATGTTTTGCAAGCAACAG
CCAAGAAAGTTAGATTTGGTCGTAACAAAAATCAAAGACAAGAACAAAAACATACTGGCGCTTTCTGTGATAAAGAATTT
TATCCTTGCGAAGGTGGTCAGTGCCAATCCGTCGATACTACACAAGAATCTTGCTACGGCAAAATGTATTGTGTCCGTGT
TAACGATGACTGTAACGTGGAAATTAGCCAAGCTGTACCTGAATATGCAACAGTAGGATCTCCTTATCCTATTGAAATTC
TTGCTGTAGGTAAAAAAGATTGCGTTAATGTTGTGATCACTCAACAACTTCCTTGCGAAGTTGAGTTTGTCAGCAGTGAT
CCTGCGACAACACCAACCTCAGATAGCAAATTAATCTGGACAATTGATTGCTTAGGTCAAGGTGAAAAATGCAAAATTAC
CGTTTGGGTAAAACCTCTTAAAGAAGGTTGTTGCTTCACCGCGGCTACTGTATGCGCTTGCCCAGAACTTCGCTCTTATA
CCAAATGCGGACAACCAGCTATTTGTATTAAGCAAGAAGGCCCTGAGTGTGCTTGCTTACGTTGCCCAGTTTGTTACAAA
ATCGAAGTTTGCAACACAGGTTCTGCTATAGCCCGTAATGTTGTCGTTGATAACCCTGTTCCCGATGGCTATACTCACGC
TTCAGGACAACGCGTTCTTTCCTTTAACTTAGGAGATATGCGCCCTGGGGATTCTAAATGCTTCTCTGTGGAGTTTTGCC
CGCAAAAAAGAGGAAAAATTACTAACGTAGCTACCGTATCTTACTGCGGAGGACATAAATGTTCCGCGAACGTAACTACT
GTAGTTAACGAACCCTGCGTACAAGTCAATATCTCTGGAGCTGACTGGTCTTATGTATGTAAGCCTGTAGAATACACTAT
CGTTGTGTCCAACCTAGGGGATCTTAAACTTTACGATGTCGTTGTAGAAGATACCGTACCTTCAGGAGCTACAATTTTAG
AAGCCGAGGGAGCTGAAATCTGCTGTAACAAAGCTGTATGGTGCATCAAAGAGATGTGCCCAGGAGAGACTCTACAATTT
AAAGTTGTTGCTAAAGCACAAAGCCCAGGTAAATTCACAAATCAAGTTGTTGTCAAAACAAACTCCGATTGTGGAACTTG
CACTTCTTGTGCAGAAGCTACAACCCATTGGAAAGGTCTGGCAGCTACTCATATGTGCGTAATCGATACCAATGATCCTA
TTTGCGTAGGAGAAAATACTGTATACCGTATTTGTGTAACAAACCGTGGTTCTGCAGAAGATACTAACGTTTCATTAATC
CTGAAGTTTTCTAAGGAGCTGCAACCCGTTTCTTCTTCAGGCCCAACAAAAGGAACCATTACAGGAAATACAGTCGTATT
CGATGCTCTGCCTAAATTAGGTTCTAAGGAATCTGTAGAGTTTTCTGTAACATTAAAAGGGATTGCCCCTGGAGATGCAC
GAGGAGAGGCTATTCTTTCTTCAGATACTTTAACGGTACCCGTTGCTGATACAGAAAATACGCACGTTTATTAA

Upstream 100 bases:

>100_bases
ACTGCCTTTATGAAAAATAAACTTAAATGTTGAGGGTAAGAGTTCACAACTTTCTACCCGATGGCAGAAGAAAAAATAAC
ACACGCGATAGGAGATCCCT

Downstream 100 bases:

>100_bases
TCTTTTACGTTGCTTATTTTAAAAGATTTGTAAACGAAAAAAGGCCGTCCTAGAGTTGTCTAGGATGGCTTTTTTGTTTC
TCTTTGTCACCGTAACGATT

Product: membrane protein

Products: NA

Alternate protein names: Large-CRP; 60 kDa CRP; 60 kDa outer membrane protein; Cysteine-rich outer membrane protein [H]

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSKLIRRVVTVLALTSMASSFASGKIEAAAAESLATRFIASTENSNDNVLQATAKKVRFGRNKNQRQEQKHTGAFCDKEF
YPCEGGQCQSVDTTQESCYGKMYCVRVNDDCNVEISQAVPEYATVGSPYPIEILAVGKKDCVNVVITQQLPCEVEFVSSD
PATTPTSDSKLIWTIDCLGQGEKCKITVWVKPLKEGCCFTAATVCACPELRSYTKCGQPAICIKQEGPECACLRCPVCYK
IEVCNTGSAIARNVVVDNPVPDGYTHASGQRVLSFNLGDMRPGDSKCFSVEFCPQKRGKITNVATVSYCGGHKCSANVTT
VVNEPCVQVNISGADWSYVCKPVEYTIVVSNLGDLKLYDVVVEDTVPSGATILEAEGAEICCNKAVWCIKEMCPGETLQF
KVVAKAQSPGKFTNQVVVKTNSDCGTCTSCAEATTHWKGLAATHMCVIDTNDPICVGENTVYRICVTNRGSAEDTNVSLI
LKFSKELQPVSSSGPTKGTITGNTVVFDALPKLGSKESVEFSVTLKGIAPGDARGEAILSSDTLTVPVADTENTHVY

Sequences:

>Translated_557_residues
MSKLIRRVVTVLALTSMASSFASGKIEAAAAESLATRFIASTENSNDNVLQATAKKVRFGRNKNQRQEQKHTGAFCDKEF
YPCEGGQCQSVDTTQESCYGKMYCVRVNDDCNVEISQAVPEYATVGSPYPIEILAVGKKDCVNVVITQQLPCEVEFVSSD
PATTPTSDSKLIWTIDCLGQGEKCKITVWVKPLKEGCCFTAATVCACPELRSYTKCGQPAICIKQEGPECACLRCPVCYK
IEVCNTGSAIARNVVVDNPVPDGYTHASGQRVLSFNLGDMRPGDSKCFSVEFCPQKRGKITNVATVSYCGGHKCSANVTT
VVNEPCVQVNISGADWSYVCKPVEYTIVVSNLGDLKLYDVVVEDTVPSGATILEAEGAEICCNKAVWCIKEMCPGETLQF
KVVAKAQSPGKFTNQVVVKTNSDCGTCTSCAEATTHWKGLAATHMCVIDTNDPICVGENTVYRICVTNRGSAEDTNVSLI
LKFSKELQPVSSSGPTKGTITGNTVVFDALPKLGSKESVEFSVTLKGIAPGDARGEAILSSDTLTVPVADTENTHVY
>Mature_556_residues
SKLIRRVVTVLALTSMASSFASGKIEAAAAESLATRFIASTENSNDNVLQATAKKVRFGRNKNQRQEQKHTGAFCDKEFY
PCEGGQCQSVDTTQESCYGKMYCVRVNDDCNVEISQAVPEYATVGSPYPIEILAVGKKDCVNVVITQQLPCEVEFVSSDP
ATTPTSDSKLIWTIDCLGQGEKCKITVWVKPLKEGCCFTAATVCACPELRSYTKCGQPAICIKQEGPECACLRCPVCYKI
EVCNTGSAIARNVVVDNPVPDGYTHASGQRVLSFNLGDMRPGDSKCFSVEFCPQKRGKITNVATVSYCGGHKCSANVTTV
VNEPCVQVNISGADWSYVCKPVEYTIVVSNLGDLKLYDVVVEDTVPSGATILEAEGAEICCNKAVWCIKEMCPGETLQFK
VVAKAQSPGKFTNQVVVKTNSDCGTCTSCAEATTHWKGLAATHMCVIDTNDPICVGENTVYRICVTNRGSAEDTNVSLIL
KFSKELQPVSSSGPTKGTITGNTVVFDALPKLGSKESVEFSVTLKGIAPGDARGEAILSSDTLTVPVADTENTHVY

Specific function: In elementary bodies (EBs, the infectious stage, which is able to survive outside the host cell) provides the structural integrity of the outer envelope through disulfide cross-links with the small cysteine-rich protein and the major outer membrane porin.

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003506
- InterPro:   IPR001434 [H]

Pfam domain/function: PF03504 Chlam_OMP6; PF01345 DUF11 [H]

EC number: NA

Molecular weight: Translated: 59761; Mature: 59630

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLIRRVVTVLALTSMASSFASGKIEAAAAESLATRFIASTENSNDNVLQATAKKVRFG
CHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCC
RNKNQRQEQKHTGAFCDKEFYPCEGGQCQSVDTTQESCYGKMYCVRVNDDCNVEISQAVP
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEHHHCCC
EYATVGSPYPIEILAVGKKDCVNVVITQQLPCEVEFVSSDPATTPTSDSKLIWTIDCLGQ
CHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCC
GEKCKITVWVKPLKEGCCFTAATVCACPELRSYTKCGQPAICIKQEGPECACLRCPVCYK
CCEEEEEEEEEECCCCCEEHHHHHHCCHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEE
IEVCNTGSAIARNVVVDNPVPDGYTHASGQRVLSFNLGDMRPGDSKCFSVEFCPQKRGKI
EEEECCCCHHHCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCE
TNVATVSYCGGHKCSANVTTVVNEPCVQVNISGADWSYVCKPVEYTIVVSNLGDLKLYDV
EEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEEEEECCCCEEEEEE
VVEDTVPSGATILEAEGAEICCNKAVWCIKEMCPGETLQFKVVAKAQSPGKFTNQVVVKT
EEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEE
NSDCGTCTSCAEATTHWKGLAATHMCVIDTNDPICVGENTVYRICVTNRGSAEDTNVSLI
CCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCCEEEE
LKFSKELQPVSSSGPTKGTITGNTVVFDALPKLGSKESVEFSVTLKGIAPGDARGEAILS
EEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCEEEE
SDTLTVPVADTENTHVY
CCEEEEEECCCCCCCCC
>Mature Secondary Structure 
SKLIRRVVTVLALTSMASSFASGKIEAAAAESLATRFIASTENSNDNVLQATAKKVRFG
HHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCC
RNKNQRQEQKHTGAFCDKEFYPCEGGQCQSVDTTQESCYGKMYCVRVNDDCNVEISQAVP
CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCCCCEEHHHCCC
EYATVGSPYPIEILAVGKKDCVNVVITQQLPCEVEFVSSDPATTPTSDSKLIWTIDCLGQ
CHHHCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCC
GEKCKITVWVKPLKEGCCFTAATVCACPELRSYTKCGQPAICIKQEGPECACLRCPVCYK
CCEEEEEEEEEECCCCCEEHHHHHHCCHHHHHHHHCCCCEEEEECCCCCEEEEECCEEEE
IEVCNTGSAIARNVVVDNPVPDGYTHASGQRVLSFNLGDMRPGDSKCFSVEFCPQKRGKI
EEEECCCCHHHCCEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCE
TNVATVSYCGGHKCSANVTTVVNEPCVQVNISGADWSYVCKPVEYTIVVSNLGDLKLYDV
EEEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCEEEECCEEEEEEEECCCCEEEEEE
VVEDTVPSGATILEAEGAEICCNKAVWCIKEMCPGETLQFKVVAKAQSPGKFTNQVVVKT
EEECCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEE
NSDCGTCTSCAEATTHWKGLAATHMCVIDTNDPICVGENTVYRICVTNRGSAEDTNVSLI
CCCCCCHHHHHHHHHHCCCEEEEEEEEEECCCCEEECCCCEEEEEEECCCCCCCCCEEEE
LKFSKELQPVSSSGPTKGTITGNTVVFDALPKLGSKESVEFSVTLKGIAPGDARGEAILS
EEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCEEEE
SDTLTVPVADTENTHVY
CCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8918247; 12682364 [H]