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The map label for this gene is srp

Identifier: 62184826

GI number: 62184826

Start: 200971

End: 201453

Strand: Direct

Name: srp

Synonym: CAB182

Alternate gene names: 62184826

Gene position: 200971-201453 (Clockwise)

Preceding gene: 62184825

Following gene: 62184829

Centisome position: 17.56

GC content: 36.65

Gene sequence:

>483_bases
ATGGCAGGTGAAAGTACAAATAGTGTAGGTAACGATATTACCAGCTTAATCCAACCTGGATTAGATCAGGTAATACAGGA
TGAAGGGGTACAGGTAACTTTGATTAATTCTATACTAGGTTGGTGTAGAATACACATAATCAACCCAGTAAAATCATCAA
AAATCGTCAAATCAAGAGCATTCCAAATTACTATGATCGTACTGGGAATTATCTTACTTATAGCTGGTTTAGCTTTAACA
TTTGTATTGCAAGGGCAATTGGGAAACAATGCTTTCTTATTCTTGATCCCTGCAGTTATTGGTTTGGTTAAGTTGCTAGC
AACCTCAGTGTTTATGGAAAAACCTTGTACCCCAGAAAAATGGCGTCTATGCAAACGTCTATTGGCAACAACTGAAGATA
TTTTAGATGATGGTCAGATTAACCAATCCAATACGATTTTTACTATGGACAGCTCTGAATCAACAAATGCTGCAGCATCA
TAG

Upstream 100 bases:

>100_bases
CCATCCTGGGAAATAGCACAAAATTAAATTAAAAATTTTAATTAATACCTGACTAGGTTAAACTCTTTTGTCTTAATGTA
TTTAGAGAAGGAGTTTTCGT

Downstream 100 bases:

>100_bases
TAAAATACAGACCTATGAATTTTTAATATTTTAAATATTTAGGAGGTGTTTAACCTCCTAAAGACACAGCCGCTTTACGA
TCCCTTAACAGGATCATATC

Product: putative sulfur-rich membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAGESTNSVGNDITSLIQPGLDQVIQDEGVQVTLINSILGWCRIHIINPVKSSKIVKSRAFQITMIVLGIILLIAGLALT
FVLQGQLGNNAFLFLIPAVIGLVKLLATSVFMEKPCTPEKWRLCKRLLATTEDILDDGQINQSNTIFTMDSSESTNAAAS

Sequences:

>Translated_160_residues
MAGESTNSVGNDITSLIQPGLDQVIQDEGVQVTLINSILGWCRIHIINPVKSSKIVKSRAFQITMIVLGIILLIAGLALT
FVLQGQLGNNAFLFLIPAVIGLVKLLATSVFMEKPCTPEKWRLCKRLLATTEDILDDGQINQSNTIFTMDSSESTNAAAS
>Mature_159_residues
AGESTNSVGNDITSLIQPGLDQVIQDEGVQVTLINSILGWCRIHIINPVKSSKIVKSRAFQITMIVLGIILLIAGLALTF
VLQGQLGNNAFLFLIPAVIGLVKLLATSVFMEKPCTPEKWRLCKRLLATTEDILDDGQINQSNTIFTMDSSESTNAAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRPS_CHLAB (Q5L6T1)

Other databases:

- EMBL:   CR848038
- RefSeq:   YP_219611.1
- GeneID:   3338209
- GenomeReviews:   CR848038_GR
- KEGG:   cab:CAB182
- HOGENOM:   HBG052389
- OMA:   NQSNTIF
- ProtClustDB:   CLSK871382
- BioCyc:   CABO218497:CAB182-MONOMER
- InterPro:   IPR008436

Pfam domain/function: PF05745 CRPA

EC number: NA

Molecular weight: Translated: 17271; Mature: 17140

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-; HASH(0x9600788)-;

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGESTNSVGNDITSLIQPGLDQVIQDEGVQVTLINSILGWCRIHIINPVKSSKIVKSRA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHH
FQITMIVLGIILLIAGLALTFVLQGQLGNNAFLFLIPAVIGLVKLLATSVFMEKPCTPEK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WRLCKRLLATTEDILDDGQINQSNTIFTMDSSESTNAAAS
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCH
>Mature Secondary Structure 
AGESTNSVGNDITSLIQPGLDQVIQDEGVQVTLINSILGWCRIHIINPVKSSKIVKSRA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHH
FQITMIVLGIILLIAGLALTFVLQGQLGNNAFLFLIPAVIGLVKLLATSVFMEKPCTPEK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
WRLCKRLLATTEDILDDGQINQSNTIFTMDSSESTNAAAS
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA