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The map label for this gene is 62184791

Identifier: 62184791

GI number: 62184791

Start: 157958

End: 159043

Strand: Direct

Name: 62184791

Synonym: CAB146

Alternate gene names: NA

Gene position: 157958-159043 (Clockwise)

Preceding gene: 62184787

Following gene: 62184794

Centisome position: 13.8

GC content: 41.71

Gene sequence:

>1086_bases
ATGACTTGGCGAAAAACGATTCGGTGGCTGAAGCAAGCTTTAGTTTTAAGCGCAGTATTAAATATTGTTTTTTTACTTTT
GTTTTACTCAACTATTTTCAGAAAGGACATTTATAAACTGCGGTTATTTTCAGGTCCTTTAGTAGCTAAGAACTGTCGAG
TACAAAAAATCCCTGAAGATTTTTTGGAGAGGCTATCTGAAGCGTCTCTTGAGGAATTGTATCGCTTGTTGGATGAGGAT
CATTTGCTCTATGGGAGACCATTAAAGTTGTGGGCGTTGAGTGTCGCTATTCATGCTTATGATGTCGATGTGGGAGGAGC
TCTTTCTCATCCTTTGACATTCACTCAGTTGCGTAGTCAGGGGAAAACATGGTTGCTTCCGAATATTGATGAGAAAGAGT
ACGGTTTAGTACGACGTTACTTATCGCGCGAGCGCTATCCTTTCACTACACGAGGGTTGTTTAGGGCGATTTCTACACAT
TTAGAGCAGGGGGCCGTTGACGAAGATTGTTTGTACCATTTTTGTCATACCCCAGAATTTCTGTATTTTCGCACATTACT
TTGTGGTGCTGAAGAGCGTGTATCTTCCGTGGCTTCCTTAGCAAGAATGGTTATACATAATGGGGAGGCGATGTTTTTTT
CCTTATGTAATGAGAATCATCGAGCAACAGCCATTTCCCCTGAACAACGACAAAAAGTTTTATTGACCTATACAAGTGTC
GGCGAACCTCTAGCAGCTTTATTGCTTCTGGTTTATGATGCAGATTGGGTGTTGCATACATTTACAGATGAGGATTTGAA
AACCTTTGTTGCTCTTCTCCCTAAGGAATCTCCTTATACTCAGGATTTTATTCATCGGATTGTCGAGACACCGCGTTCTT
TTATTGTTGAAGCCGAGAAGGCTGAGGCGTGCGTGACAGAGGAACCTATTGTTTACGAAGACTATGTTGTAAAAGAGGGG
GATTCTTTATGGTTAATCGCACGCCGTTTTGGCGTAACTATTGAAGACATCATGCGTGTGAATCACCTGAGTCATCATCG
TTTGTTACCTGGGAAACATCTAAAGCTTCCTCCAAAGTCGTCATAG

Upstream 100 bases:

>100_bases
AAAGGTGAGACATTTTTGTGACAGATTTTACGAGGAGGAGTGTATAGTGGCAAGTATTTTAATGCTTAGAGAGGGGCTCG
GCTTTCAGAGGTGATCTTTA

Downstream 100 bases:

>100_bases
GGACGAGATCGATTCCCCCTGGGTGCCAAGGCCCACATTTTCCTATTCTTTTTATTGTCAACCAGAGCCCTCGAATACAC
TTATGATGTTTTAACGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTWRKTIRWLKQALVLSAVLNIVFLLLFYSTIFRKDIYKLRLFSGPLVAKNCRVQKIPEDFLERLSEASLEELYRLLDED
HLLYGRPLKLWALSVAIHAYDVDVGGALSHPLTFTQLRSQGKTWLLPNIDEKEYGLVRRYLSRERYPFTTRGLFRAISTH
LEQGAVDEDCLYHFCHTPEFLYFRTLLCGAEERVSSVASLARMVIHNGEAMFFSLCNENHRATAISPEQRQKVLLTYTSV
GEPLAALLLLVYDADWVLHTFTDEDLKTFVALLPKESPYTQDFIHRIVETPRSFIVEAEKAEACVTEEPIVYEDYVVKEG
DSLWLIARRFGVTIEDIMRVNHLSHHRLLPGKHLKLPPKSS

Sequences:

>Translated_361_residues
MTWRKTIRWLKQALVLSAVLNIVFLLLFYSTIFRKDIYKLRLFSGPLVAKNCRVQKIPEDFLERLSEASLEELYRLLDED
HLLYGRPLKLWALSVAIHAYDVDVGGALSHPLTFTQLRSQGKTWLLPNIDEKEYGLVRRYLSRERYPFTTRGLFRAISTH
LEQGAVDEDCLYHFCHTPEFLYFRTLLCGAEERVSSVASLARMVIHNGEAMFFSLCNENHRATAISPEQRQKVLLTYTSV
GEPLAALLLLVYDADWVLHTFTDEDLKTFVALLPKESPYTQDFIHRIVETPRSFIVEAEKAEACVTEEPIVYEDYVVKEG
DSLWLIARRFGVTIEDIMRVNHLSHHRLLPGKHLKLPPKSS
>Mature_360_residues
TWRKTIRWLKQALVLSAVLNIVFLLLFYSTIFRKDIYKLRLFSGPLVAKNCRVQKIPEDFLERLSEASLEELYRLLDEDH
LLYGRPLKLWALSVAIHAYDVDVGGALSHPLTFTQLRSQGKTWLLPNIDEKEYGLVRRYLSRERYPFTTRGLFRAISTHL
EQGAVDEDCLYHFCHTPEFLYFRTLLCGAEERVSSVASLARMVIHNGEAMFFSLCNENHRATAISPEQRQKVLLTYTSVG
EPLAALLLLVYDADWVLHTFTDEDLKTFVALLPKESPYTQDFIHRIVETPRSFIVEAEKAEACVTEEPIVYEDYVVKEGD
SLWLIARRFGVTIEDIMRVNHLSHHRLLPGKHLKLPPKSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM [H]

EC number: NA

Molecular weight: Translated: 41770; Mature: 41639

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWRKTIRWLKQALVLSAVLNIVFLLLFYSTIFRKDIYKLRLFSGPLVAKNCRVQKIPED
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHH
FLERLSEASLEELYRLLDEDHLLYGRPLKLWALSVAIHAYDVDVGGALSHPLTFTQLRSQ
HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHC
GKTWLLPNIDEKEYGLVRRYLSRERYPFTTRGLFRAISTHLEQGAVDEDCLYHFCHTPEF
CCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH
LYFRTLLCGAEERVSSVASLARMVIHNGEAMFFSLCNENHRATAISPEQRQKVLLTYTSV
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCEEEEEECCC
GEPLAALLLLVYDADWVLHTFTDEDLKTFVALLPKESPYTQDFIHRIVETPRSFIVEAEK
CHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEECHH
AEACVTEEPIVYEDYVVKEGDSLWLIARRFGVTIEDIMRVNHLSHHRLLPGKHLKLPPKS
HHHHCCCCCEEEECEEEECCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
S
C
>Mature Secondary Structure 
TWRKTIRWLKQALVLSAVLNIVFLLLFYSTIFRKDIYKLRLFSGPLVAKNCRVQKIPED
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHH
FLERLSEASLEELYRLLDEDHLLYGRPLKLWALSVAIHAYDVDVGGALSHPLTFTQLRSQ
HHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHC
GKTWLLPNIDEKEYGLVRRYLSRERYPFTTRGLFRAISTHLEQGAVDEDCLYHFCHTPEF
CCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH
LYFRTLLCGAEERVSSVASLARMVIHNGEAMFFSLCNENHRATAISPEQRQKVLLTYTSV
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCEEEEEECCC
GEPLAALLLLVYDADWVLHTFTDEDLKTFVALLPKESPYTQDFIHRIVETPRSFIVEAEK
CHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEECHH
AEACVTEEPIVYEDYVVKEGDSLWLIARRFGVTIEDIMRVNHLSHHRLLPGKHLKLPPKS
HHHHCCCCCEEEECEEEECCCCEEEEHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]