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The map label for this gene is oppC [H]

Identifier: 62184787

GI number: 62184787

Start: 152229

End: 153962

Strand: Direct

Name: oppC [H]

Synonym: CAB142

Alternate gene names: 62184787

Gene position: 152229-153962 (Clockwise)

Preceding gene: 62184786

Following gene: 62184791

Centisome position: 13.3

GC content: 39.5

Gene sequence:

>1734_bases
ATGGAATCCCCGACTTCTTTTTATCGCCGATTCTTTCAGGCATACCATAAGAATTTCCTTGCCTCTCTGTCATGGAAGTT
TGTTATCGCATTAGTACTTCTAGGTGTATATGCACCTCTATTTGCGAGTAGTAAACCTATTGTAGTTCAATGGGAGGGGT
CTCTATATTTCCCTTTATTTAGATATTTATGGTTCTCAGGTTTTTATACTAAGGCTATAGATCTGTTTTTTAATGTTTTG
ATGGCAACTCTGCCGTTGTTCTTTATAGCTTGCAAGCTCTTTAAGAGAAGAGCTCGTAGGGCTCTTCTTGGGATTTTAAC
TCTTGCTCAAGTATTAGGATTTATCTTTGTATACCAAGGGAATATCCAAGATCCCGCTGGAGATGAAAATCTGAAAAAAT
TGCGAGCAGAGAAAATCCTTTCGCAAATTGCCAATAGCAGAACAGAAAATATCGTTTTACTTCCTAAAGATGTGCGTACT
TGGGAATTAGAAAAGACATACATGAGTAAGTACGAGCAGTTGGGAATTTTGATAAAGTCAAAATACCGTAAATTACAGCA
CGAGAAATTACAGAAGTATTGTGTGGCGTATGAGGGGTACAAAGGTTCACCAATGCCCACGCTGTACTACTCACAGATGA
AAAATGAGCAGGTATGTTTGGAGCGTTTACAACAAAGACTAGACAAGTTGCACGCTTCTTACGAATCAGCATTACAAACT
TGGTATAAGGCAATAGATGAGTACCGTCCTTTTCTTATGGCGCTCACTCGAGTCGAACATGATTTGAACCTAGCTTTATA
TAATAAAGATCATAATGAGAGATTACGTTCAGCGTATTCTTCGATAGAAGAAGAAGCGGAACCTTTCCGTAAGCACCTAT
TAAGTACACGCCGGGTTCTTGAGGAATACAATAAAATCCATAGCGCGATTAACTTTATTCAAGATAAACGTGCGTGGATT
AACGAAGAATCTGAAAAACTTCGCATTCTTATCAACCCGTTGCTGAGTTCTTTCCATTGGGAAGATGATGCGGGAGGTTC
TCATGAGATGAATAAGTACATACGTTGGTGGCAGCGCACACGAATTAATCGCAAAGATCTTTTAGCCTCTTTAATTTTCG
GGATTCGTATTGCTATAGTTGTCGGAGGGATCTCCGTTGCCATTGCTTTGTTTATTGGTACGGTTATTGGTTTAGTTTCT
GGGTATTTTGGCGGAACTACGGATATGGTTCTTTCTAGATTTACTGAGATTTGGGAAACCATGCCCATGTTGTTTATTTT
GATGCTCGTGGTGTCTATAACGCAGAAAAAATCCTTATTTTTAGATACAATCTTACTTGGATGTTTCGGTTGGACAGGAT
TTAGCAGATACATCAGAATAGAAACCTTAAAACAACGCAATATGTCCTATGTGTTAGCGGCGACAAATATGTGTTACAGC
CATTATCACATTATGGTACATCAGATACTTCCTAATGCGATTGTCCCGGTGATTTCCCTACTGCCGTTTTCTATGATGGC
AATGATTAGCTGTGAGGCGGGGTTAACATTTTTAGGTCTCGGAGAGGAAAGCTCTGTGTCTTGGGGAAATCTTATGAAAG
AAGGAGTGACAGCTTTTCCTTCGGAAAGTTGTATTCTTTGGCCTCCTGCCATTATGCTGACCGCTTTGCTTATTGCTATA
GCATTGATAGGAGATGGTATTCGAGACGCTCTAGATCCTAAATTACAAGACTAA

Upstream 100 bases:

>100_bases
CTCGTTGGATCCGCTCTATCCCTATTAGGTTATTTAATAGGGGATATTTGCTACGTGCTATTAGATCCGAGGGTACAACT
AGGAGGTAAGAGGGTTTAAA

Downstream 100 bases:

>100_bases
CTTATAGACCCCTCAAAATTGAGGAGGATATCTTGGATCTGTTTTCCTGCACAGTAATGGCGTTCGCCATGACTTCCTAT
GACTCTGTGGCAGGGGAAAA

Product: putative transport protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 577; Mature: 577

Protein sequence:

>577_residues
MESPTSFYRRFFQAYHKNFLASLSWKFVIALVLLGVYAPLFASSKPIVVQWEGSLYFPLFRYLWFSGFYTKAIDLFFNVL
MATLPLFFIACKLFKRRARRALLGILTLAQVLGFIFVYQGNIQDPAGDENLKKLRAEKILSQIANSRTENIVLLPKDVRT
WELEKTYMSKYEQLGILIKSKYRKLQHEKLQKYCVAYEGYKGSPMPTLYYSQMKNEQVCLERLQQRLDKLHASYESALQT
WYKAIDEYRPFLMALTRVEHDLNLALYNKDHNERLRSAYSSIEEEAEPFRKHLLSTRRVLEEYNKIHSAINFIQDKRAWI
NEESEKLRILINPLLSSFHWEDDAGGSHEMNKYIRWWQRTRINRKDLLASLIFGIRIAIVVGGISVAIALFIGTVIGLVS
GYFGGTTDMVLSRFTEIWETMPMLFILMLVVSITQKKSLFLDTILLGCFGWTGFSRYIRIETLKQRNMSYVLAATNMCYS
HYHIMVHQILPNAIVPVISLLPFSMMAMISCEAGLTFLGLGEESSVSWGNLMKEGVTAFPSESCILWPPAIMLTALLIAI
ALIGDGIRDALDPKLQD

Sequences:

>Translated_577_residues
MESPTSFYRRFFQAYHKNFLASLSWKFVIALVLLGVYAPLFASSKPIVVQWEGSLYFPLFRYLWFSGFYTKAIDLFFNVL
MATLPLFFIACKLFKRRARRALLGILTLAQVLGFIFVYQGNIQDPAGDENLKKLRAEKILSQIANSRTENIVLLPKDVRT
WELEKTYMSKYEQLGILIKSKYRKLQHEKLQKYCVAYEGYKGSPMPTLYYSQMKNEQVCLERLQQRLDKLHASYESALQT
WYKAIDEYRPFLMALTRVEHDLNLALYNKDHNERLRSAYSSIEEEAEPFRKHLLSTRRVLEEYNKIHSAINFIQDKRAWI
NEESEKLRILINPLLSSFHWEDDAGGSHEMNKYIRWWQRTRINRKDLLASLIFGIRIAIVVGGISVAIALFIGTVIGLVS
GYFGGTTDMVLSRFTEIWETMPMLFILMLVVSITQKKSLFLDTILLGCFGWTGFSRYIRIETLKQRNMSYVLAATNMCYS
HYHIMVHQILPNAIVPVISLLPFSMMAMISCEAGLTFLGLGEESSVSWGNLMKEGVTAFPSESCILWPPAIMLTALLIAI
ALIGDGIRDALDPKLQD
>Mature_577_residues
MESPTSFYRRFFQAYHKNFLASLSWKFVIALVLLGVYAPLFASSKPIVVQWEGSLYFPLFRYLWFSGFYTKAIDLFFNVL
MATLPLFFIACKLFKRRARRALLGILTLAQVLGFIFVYQGNIQDPAGDENLKKLRAEKILSQIANSRTENIVLLPKDVRT
WELEKTYMSKYEQLGILIKSKYRKLQHEKLQKYCVAYEGYKGSPMPTLYYSQMKNEQVCLERLQQRLDKLHASYESALQT
WYKAIDEYRPFLMALTRVEHDLNLALYNKDHNERLRSAYSSIEEEAEPFRKHLLSTRRVLEEYNKIHSAINFIQDKRAWI
NEESEKLRILINPLLSSFHWEDDAGGSHEMNKYIRWWQRTRINRKDLLASLIFGIRIAIVVGGISVAIALFIGTVIGLVS
GYFGGTTDMVLSRFTEIWETMPMLFILMLVVSITQKKSLFLDTILLGCFGWTGFSRYIRIETLKQRNMSYVLAATNMCYS
HYHIMVHQILPNAIVPVISLLPFSMMAMISCEAGLTFLGLGEESSVSWGNLMKEGVTAFPSESCILWPPAIMLTALLIAI
ALIGDGIRDALDPKLQD

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=33.7777777777778, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1787498, Length=255, Percent_Identity=31.7647058823529, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787760, Length=229, Percent_Identity=31.4410480349345, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787054, Length=213, Percent_Identity=26.2910798122066, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI1789964, Length=268, Percent_Identity=27.6119402985075, Blast_Score=78, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 66568; Mature: 66568

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEECCHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
>Mature Secondary Structure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CCCEEECCHHHHHHHHHHHHHHHCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]