| Definition | Chlamydophila abortus S26/3, complete genome. |
|---|---|
| Accession | NC_004552 |
| Length | 1,144,377 |
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The map label for this gene is 62184736
Identifier: 62184736
GI number: 62184736
Start: 107060
End: 108034
Strand: Direct
Name: 62184736
Synonym: CAB092
Alternate gene names: NA
Gene position: 107060-108034 (Clockwise)
Preceding gene: 62184735
Following gene: 62184737
Centisome position: 9.36
GC content: 43.38
Gene sequence:
>975_bases ATGGCATCTGTAACACCACAAGTGGCTGCCCTGGCTATGGGAGGCCGAAACGTGTTTATACAAACAGCAATGCAAAAAAC TCGCAGAGGTGTAGCTGGCAATTGCGTGAAGATGTTTTGTACTCGAAGAGATAATCATTTAGCGCGTTTTGTCGGTAGTA CTAAAAATTTAGATAAAGCCTTTAAATTCGCTAAATCAGTTTCTGAGTTTAGTTGTGGCGTTATTGAAAGTTCAGGAAAT ACAGGAGCCTCTCTTGAGACAGCTAGAAATGTGGCCGGAACTTTAGGTACAGCAAGATCTGTTGTGGCTTTAAGTAACGT CTTTAACGGCGCCATCCCCGGTTGCATTAGCTCTTCAAAGAATTGCTTCGCACACATCAAGAAATGCTTCACTCCAGAAT CTCACTACGATCTTGGCAACGCCGAGAAAGGGCTGCCTTATAACAAAATCTACCTGACTAAGGGCGATCACGCATTAGCC GCAATTAAAGAGGGTTGTTCTGCAGTCGGTGCAGCTACATATATTGGAACATTCGGGGTATGCCGTCCGGTTCTGTTAGC AAACAAACTCGCACACAAACCTTTCCTTCCTAAAGATGTGAAAACAGGATTTGGCGATGCTGTAACCTACATGATGACAG CTAACCACGCTGCCAGTGTGATCGGAGGAGCTGCTTCCTTAATGTATGAAAACCGCGCCTATCAACGTGCTTCTGCAGGA TTAGAAGATGCTAGAATCGCCGAAACTTTGACGGTCGATGTGTATAATCAAGTATCTCAAGAATTAAGAGAGTCACATCT TGCAGTTGTTAAAAAAACTATATTAGCGATTTTAGAAAAAGCATTTGAATTGATAGCAGATGTTGTCAAATTAATTCCTT TCCCAACCACTGCTTCAGTTCGATTGGCTGTGACATCAGGAGCTGTTGTCATTTCTAGCGGTATCGGTCTGTACAGCGCA TGGGCTCATTCATAA
Upstream 100 bases:
>100_bases TAGTCAATATAATTCACTTTATTAATTGGCTTTTGTGTTATAATTGGGGCTTAAAATCTTTATTCTGCTAAAAAAACCTT TTAATTTTAGGGAGGTGAAT
Downstream 100 bases:
>100_bases GAAAAAGATTTGTCAATTTCGCCAATATTGTAAATCGCTTCTAGAAAACCTAGAAGCGATTTATTTATTAGCGAACTAAG ATTTTATAAGAACTTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MASVTPQVAALAMGGRNVFIQTAMQKTRRGVAGNCVKMFCTRRDNHLARFVGSTKNLDKAFKFAKSVSEFSCGVIESSGN TGASLETARNVAGTLGTARSVVALSNVFNGAIPGCISSSKNCFAHIKKCFTPESHYDLGNAEKGLPYNKIYLTKGDHALA AIKEGCSAVGAATYIGTFGVCRPVLLANKLAHKPFLPKDVKTGFGDAVTYMMTANHAASVIGGAASLMYENRAYQRASAG LEDARIAETLTVDVYNQVSQELRESHLAVVKKTILAILEKAFELIADVVKLIPFPTTASVRLAVTSGAVVISSGIGLYSA WAHS
Sequences:
>Translated_324_residues MASVTPQVAALAMGGRNVFIQTAMQKTRRGVAGNCVKMFCTRRDNHLARFVGSTKNLDKAFKFAKSVSEFSCGVIESSGN TGASLETARNVAGTLGTARSVVALSNVFNGAIPGCISSSKNCFAHIKKCFTPESHYDLGNAEKGLPYNKIYLTKGDHALA AIKEGCSAVGAATYIGTFGVCRPVLLANKLAHKPFLPKDVKTGFGDAVTYMMTANHAASVIGGAASLMYENRAYQRASAG LEDARIAETLTVDVYNQVSQELRESHLAVVKKTILAILEKAFELIADVVKLIPFPTTASVRLAVTSGAVVISSGIGLYSA WAHS >Mature_323_residues ASVTPQVAALAMGGRNVFIQTAMQKTRRGVAGNCVKMFCTRRDNHLARFVGSTKNLDKAFKFAKSVSEFSCGVIESSGNT GASLETARNVAGTLGTARSVVALSNVFNGAIPGCISSSKNCFAHIKKCFTPESHYDLGNAEKGLPYNKIYLTKGDHALAA IKEGCSAVGAATYIGTFGVCRPVLLANKLAHKPFLPKDVKTGFGDAVTYMMTANHAASVIGGAASLMYENRAYQRASAGL EDARIAETLTVDVYNQVSQELRESHLAVVKKTILAILEKAFELIADVVKLIPFPTTASVRLAVTSGAVVISSGIGLYSAW AHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34263; Mature: 34132
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVTPQVAALAMGGRNVFIQTAMQKTRRGVAGNCVKMFCTRRDNHLARFVGSTKNLDKA CCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHH FKFAKSVSEFSCGVIESSGNTGASLETARNVAGTLGTARSVVALSNVFNGAIPGCISSSK HHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCH NCFAHIKKCFTPESHYDLGNAEKGLPYNKIYLTKGDHALAAIKEGCSAVGAATYIGTFGV HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH CRPVLLANKLAHKPFLPKDVKTGFGDAVTYMMTANHAASVIGGAASLMYENRAYQRASAG HHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEDARIAETLTVDVYNQVSQELRESHLAVVKKTILAILEKAFELIADVVKLIPFPTTASV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE RLAVTSGAVVISSGIGLYSAWAHS EEEEECCEEEEECCCCHHHHCCCC >Mature Secondary Structure ASVTPQVAALAMGGRNVFIQTAMQKTRRGVAGNCVKMFCTRRDNHLARFVGSTKNLDKA CCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCHHHH FKFAKSVSEFSCGVIESSGNTGASLETARNVAGTLGTARSVVALSNVFNGAIPGCISSSK HHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCH NCFAHIKKCFTPESHYDLGNAEKGLPYNKIYLTKGDHALAAIKEGCSAVGAATYIGTFGV HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH CRPVLLANKLAHKPFLPKDVKTGFGDAVTYMMTANHAASVIGGAASLMYENRAYQRASAG HHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LEDARIAETLTVDVYNQVSQELRESHLAVVKKTILAILEKAFELIADVVKLIPFPTTASV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE RLAVTSGAVVISSGIGLYSAWAHS EEEEECCEEEEECCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA