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The map label for this gene is sufB [C]

Identifier: 62184698

GI number: 62184698

Start: 64552

End: 66006

Strand: Direct

Name: sufB [C]

Synonym: CAB051

Alternate gene names: 62184698

Gene position: 64552-66006 (Clockwise)

Preceding gene: 62184697

Following gene: 62184699

Centisome position: 5.64

GC content: 40.21

Gene sequence:

>1455_bases
ATGAGCCAATCTATAGAAGATTTTTTACATAATCATGAGGATTATCCTTATGGTTTCGTCACACCTATAGAGTCAGAGGG
GTTAACTCGGGGGCTAAGCGAAGAGACAATAATAAAAATCTCTCAGCTGCGCAACGAGCCTTCTTTCATTTTAGATTTCC
GTTTAAAAGCCTATCAGCATTGGAAAAAGTTACAAGAGCCTATATGGGCTAGACTGTCCTATCCTACGATAGATTATGAC
AGTATAGTCTATTTTTCTGCTCCAAAGCAGAAAAATCCTTTAGGGCGTTTGGAAGAAGCTGATCCTGAAATTTTAGAGAC
CTTTAAGAAATTGGGAATTCCTCTAGATGAGCAAAAGCGTTTATTAAACGTTCAAAATGTTGCTGTGGATTTAGTTTTTG
ATTCGGTGTCTATAGGAACAACATTTAAGGAAGCTCTGGATAAAGCGGGTGTGATTTTTTGCTCGATGAATGAAGCGATT
CGAGAATATCCGGAGTTAGTAAAAAAATATTTAGGGTTGGTTGTTTCTTATAGGGACAACTATTTCGCGGCTTTGAATGC
TGCAGTGTTTAGTGACGGTTCTTTTGTCTATCTTCCTAAGGGCGTGCGTTGTCCTATGGAGATATCTACGTATTTTAGGA
TTAATGACAAAGAATCGGGGCAGTTTGAGCGTACATTAATTATTGCTGAGGATGATTCTTTTGTGAGTTATCTTGAAGGG
TGTACAGCTCCATCGTATTCTTCACATCAGCTGCATGCAGCTGTTGTAGAATTAGTGGCGCATGAACGAGCGGTTGTGCG
TTATTCTACCGTGCAGAATTGGTTTTCTGGAGATAGGAAAACTGGCAAGGGTGGAATTTATAATTTTGTAACGAAGCGCG
GGTTGTGTGCGGGTTACAAATCAAAGATTTCTTGGTCCCAGGTTGAAGTTGGAGCGGCAATCACTTGGAAGTATCCTAGT
TGCATTTTGAGGGGGAAAGAAAGTGTAGGAGAGTTTTACTCTATCGCTTTAACAAATGGAAAAATGCAAGCTGATACTGG
GACGAAGATGATTCATGTGGGGGAAAAAACAACTTCTACAATAGTTTCTAAAGGAATTTCTTCAGAGGAGTCGCATAACA
CCTTTAGGAGTCTTGTTTCTATTTCTGAAGGAGCTGTTGGAAGTCGTAATCACACACAATGTGATTCGATGCTGATTGGC
CGGGCATGTGGAGCGTATACGGATCCTAGAATTTCTGTAGAAAACTCCCAATCGTCTGTTGAACATGAGGCTACAACATC
GAAATTGCGAGCAGATCAATTAATGTATTTGCGTAGTAGAGGGTTAAATGCTGAAGAGGCTGTGAGTTTAGTGGTCCACG
GTTTTTGCCTTGAAATTATCGAACAGTTACCTTTAGAGTTTGCTCGAGAAGCTTCAAAATTATTGTTTGTTAAGTTGGAA
AATAGCGTGGGGTAG

Upstream 100 bases:

>100_bases
TTCTTTAATGCTTCGAAAAATATGGACAATTTGTTAATCTGGCTAAGCCCTTGTGAAGTTTTACACAATAATATTACGAG
GAGCGCAGAGGCTGGGCATT

Downstream 100 bases:

>100_bases
TTGATGCTACATATACAAAACTTACACGTATGTTGTGAGGATGTTAAAATCCTGGATTATTTAAATTTGCATATTCATCC
GGGGGAATTACATATAATTA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MSQSIEDFLHNHEDYPYGFVTPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQHWKKLQEPIWARLSYPTIDYD
SIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKRLLNVQNVAVDLVFDSVSIGTTFKEALDKAGVIFCSMNEAI
REYPELVKKYLGLVVSYRDNYFAALNAAVFSDGSFVYLPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEG
CTAPSYSSHQLHAAVVELVAHERAVVRYSTVQNWFSGDRKTGKGGIYNFVTKRGLCAGYKSKISWSQVEVGAAITWKYPS
CILRGKESVGEFYSIALTNGKMQADTGTKMIHVGEKTTSTIVSKGISSEESHNTFRSLVSISEGAVGSRNHTQCDSMLIG
RACGAYTDPRISVENSQSSVEHEATTSKLRADQLMYLRSRGLNAEEAVSLVVHGFCLEIIEQLPLEFAREASKLLFVKLE
NSVG

Sequences:

>Translated_484_residues
MSQSIEDFLHNHEDYPYGFVTPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQHWKKLQEPIWARLSYPTIDYD
SIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKRLLNVQNVAVDLVFDSVSIGTTFKEALDKAGVIFCSMNEAI
REYPELVKKYLGLVVSYRDNYFAALNAAVFSDGSFVYLPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEG
CTAPSYSSHQLHAAVVELVAHERAVVRYSTVQNWFSGDRKTGKGGIYNFVTKRGLCAGYKSKISWSQVEVGAAITWKYPS
CILRGKESVGEFYSIALTNGKMQADTGTKMIHVGEKTTSTIVSKGISSEESHNTFRSLVSISEGAVGSRNHTQCDSMLIG
RACGAYTDPRISVENSQSSVEHEATTSKLRADQLMYLRSRGLNAEEAVSLVVHGFCLEIIEQLPLEFAREASKLLFVKLE
NSVG
>Mature_483_residues
SQSIEDFLHNHEDYPYGFVTPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQHWKKLQEPIWARLSYPTIDYDS
IVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKRLLNVQNVAVDLVFDSVSIGTTFKEALDKAGVIFCSMNEAIR
EYPELVKKYLGLVVSYRDNYFAALNAAVFSDGSFVYLPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEGC
TAPSYSSHQLHAAVVELVAHERAVVRYSTVQNWFSGDRKTGKGGIYNFVTKRGLCAGYKSKISWSQVEVGAAITWKYPSC
ILRGKESVGEFYSIALTNGKMQADTGTKMIHVGEKTTSTIVSKGISSEESHNTFRSLVSISEGAVGSRNHTQCDSMLIGR
ACGAYTDPRISVENSQSSVEHEATTSKLRADQLMYLRSRGLNAEEAVSLVVHGFCLEIIEQLPLEFAREASKLLFVKLEN
SVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=484, Percent_Identity=54.3388429752066, Blast_Score=555, Evalue=1e-159,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=25.3246753246753, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54195; Mature: 54064

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSIEDFLHNHEDYPYGFVTPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQH
CCCCHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHH
WKKLQEPIWARLSYPTIDYDSIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKR
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
LLNVQNVAVDLVFDSVSIGTTFKEALDKAGVIFCSMNEAIREYPELVKKYLGLVVSYRDN
HHHHHHEEEEEEEECCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHEEEEECCC
YFAALNAAVFSDGSFVYLPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEG
EEEEEHHHEECCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHC
CTAPSYSSHQLHAAVVELVAHERAVVRYSTVQNWFSGDRKTGKGGIYNFVTKRGLCAGYK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHH
SKISWSQVEVGAAITWKYPSCILRGKESVGEFYSIALTNGKMQADTGTKMIHVGEKTTST
CCCCCCEEEECEEEEECCCHHHHCCCHHHCCEEEEEEECCEEECCCCCEEEEECCHHHHH
IVSKGISSEESHNTFRSLVSISEGAVGSRNHTQCDSMLIGRACGAYTDPRISVENSQSSV
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHH
EHEATTSKLRADQLMYLRSRGLNAEEAVSLVVHGFCLEIIEQLPLEFAREASKLLFVKLE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEC
NSVG
CCCC
>Mature Secondary Structure 
SQSIEDFLHNHEDYPYGFVTPIESEGLTRGLSEETIIKISQLRNEPSFILDFRLKAYQH
CCCHHHHHHCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHH
WKKLQEPIWARLSYPTIDYDSIVYFSAPKQKNPLGRLEEADPEILETFKKLGIPLDEQKR
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
LLNVQNVAVDLVFDSVSIGTTFKEALDKAGVIFCSMNEAIREYPELVKKYLGLVVSYRDN
HHHHHHEEEEEEEECCCCCHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHEEEEECCC
YFAALNAAVFSDGSFVYLPKGVRCPMEISTYFRINDKESGQFERTLIIAEDDSFVSYLEG
EEEEEHHHEECCCCEEEECCCCCCCEEEEEEEEECCCCCCCEEEEEEEECCCHHHHHHHC
CTAPSYSSHQLHAAVVELVAHERAVVRYSTVQNWFSGDRKTGKGGIYNFVTKRGLCAGYK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCHH
SKISWSQVEVGAAITWKYPSCILRGKESVGEFYSIALTNGKMQADTGTKMIHVGEKTTST
CCCCCCEEEECEEEEECCCHHHHCCCHHHCCEEEEEEECCEEECCCCCEEEEECCHHHHH
IVSKGISSEESHNTFRSLVSISEGAVGSRNHTQCDSMLIGRACGAYTDPRISVENSQSSV
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCHHH
EHEATTSKLRADQLMYLRSRGLNAEEAVSLVVHGFCLEIIEQLPLEFAREASKLLFVKLE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEC
NSVG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]