| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is purQ [H]
Identifier: 28572946
GI number: 28572946
Start: 913300
End: 913980
Strand: Reverse
Name: purQ [H]
Synonym: TW805
Alternate gene names: 28572946
Gene position: 913980-913300 (Counterclockwise)
Preceding gene: 28572947
Following gene: 28572945
Centisome position: 98.71
GC content: 46.84
Gene sequence:
>681_bases TTGGTTAGAGTTGGCGTAGTTACATTCCCGGGATCGCTTGATGACAAGCAGACCTTGCGTGCCCTTTCTTTTGCTGGGTG TGCAGCTGTTCAACTTTGGCATGCAAGCGATACGCTGTCTTCGGTTGACGCCGTTATCCTCCCAGGGGGTTTTAGTTATG GCGACTATCTGCGCCCCGGCGCACTCGCAAGCCGCTCAAGGATTATGGTCAGGATTATTGAAGCTGCACATCAGGGTATG CCTGTTTTGGGGATATGCAATGGCTTTCAGCTCTTGACTGAATCAAGATTGCTTCCGGGGGCATTTGTTGCAAACAAAGC ATCACGGTTCGTATGTCTGGAACAGAGTCTAATTGTGGAGAATAATTCCACTCCATTTACCATGAATTTCTCTAAAAATC AGAATGTTATTATCCCGATAAAAAATTCGGACGGATGTTATTTTGCTCAAACCGAGGATCTTGATCGTATTGAAAATGAG GGGCGGGTTGTTCTTCGGTATGCTGGGTCTAACCCAAGTGGTTCGTCAAGAAATATTGCAGGTATTTGTAATGAACAGGG GAATATTGTTGGCATGATGCCACATCCAGAGTATGCTGTTGAACCTGGCTTTGGTCCACCCGGGCTACACGGTGCCCCTG TTTTTTCTGCCATTTCTTCATGGATTAACAACGCCCGATAG
Upstream 100 bases:
>100_bases GACGTGCGAATTGGATTTTATCCGTGATCTTGCCAATGACCTGTTGATCAACCCGGTCATAGAGGATGTTGTTGATATCA GGATCGAGGATGACTGAAAC
Downstream 100 bases:
>100_bases GCATTGCATGATTTGTGTTAGACAGGAGAATAGCTTTTGCCGTATACCGCGACCGCTCCTCGGCCAACATTGTTTCTGGT CTATGAGCCCGACTGAGGGT
Product: phosphoribosylformylglycinamidine synthase I
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I [H]
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVRVGVVTFPGSLDDKQTLRALSFAGCAAVQLWHASDTLSSVDAVILPGGFSYGDYLRPGALASRSRIMVRIIEAAHQGM PVLGICNGFQLLTESRLLPGAFVANKASRFVCLEQSLIVENNSTPFTMNFSKNQNVIIPIKNSDGCYFAQTEDLDRIENE GRVVLRYAGSNPSGSSRNIAGICNEQGNIVGMMPHPEYAVEPGFGPPGLHGAPVFSAISSWINNAR
Sequences:
>Translated_226_residues MVRVGVVTFPGSLDDKQTLRALSFAGCAAVQLWHASDTLSSVDAVILPGGFSYGDYLRPGALASRSRIMVRIIEAAHQGM PVLGICNGFQLLTESRLLPGAFVANKASRFVCLEQSLIVENNSTPFTMNFSKNQNVIIPIKNSDGCYFAQTEDLDRIENE GRVVLRYAGSNPSGSSRNIAGICNEQGNIVGMMPHPEYAVEPGFGPPGLHGAPVFSAISSWINNAR >Mature_226_residues MVRVGVVTFPGSLDDKQTLRALSFAGCAAVQLWHASDTLSSVDAVILPGGFSYGDYLRPGALASRSRIMVRIIEAAHQGM PVLGICNGFQLLTESRLLPGAFVANKASRFVCLEQSLIVENNSTPFTMNFSKNQNVIIPIKNSDGCYFAQTEDLDRIENE GRVVLRYAGSNPSGSSRNIAGICNEQGNIVGMMPHPEYAVEPGFGPPGLHGAPVFSAISSWINNAR
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI48994899, Length=226, Percent_Identity=29.2035398230088, Blast_Score=67, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321498, Length=179, Percent_Identity=28.4916201117318, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR011698 - InterPro: IPR010075 [H]
Pfam domain/function: PF07685 GATase_3 [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 24260; Mature: 24260
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRVGVVTFPGSLDDKQTLRALSFAGCAAVQLWHASDTLSSVDAVILPGGFSYGDYLRPG CEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCC ALASRSRIMVRIIEAAHQGMPVLGICNGFQLLTESRLLPGAFVANKASRFVCLEQSLIVE CCCHHHHHHHHEEHHHHCCCCEEEECCCHHHHHHCCCCCCHHHHCCCCEEEEEECEEEEE NNSTPFTMNFSKNQNVIIPIKNSDGCYFAQTEDLDRIENEGRVVLRYAGSNPSGSSRNIA CCCCCEEEEECCCCEEEEEEECCCCEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCEE GICNEQGNIVGMMPHPEYAVEPGFGPPGLHGAPVFSAISSWINNAR EEECCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MVRVGVVTFPGSLDDKQTLRALSFAGCAAVQLWHASDTLSSVDAVILPGGFSYGDYLRPG CEEEEEEECCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCC ALASRSRIMVRIIEAAHQGMPVLGICNGFQLLTESRLLPGAFVANKASRFVCLEQSLIVE CCCHHHHHHHHEEHHHHCCCCEEEECCCHHHHHHCCCCCCHHHHCCCCEEEEEECEEEEE NNSTPFTMNFSKNQNVIIPIKNSDGCYFAQTEDLDRIENEGRVVLRYAGSNPSGSSRNIA CCCCCEEEEECCCCEEEEEEECCCCEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCEE GICNEQGNIVGMMPHPEYAVEPGFGPPGLHGAPVFSAISSWINNAR EEECCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA