Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572945

Identifier: 28572945

GI number: 28572945

Start: 912816

End: 913088

Strand: Reverse

Name: 28572945

Synonym: TW804

Alternate gene names: NA

Gene position: 913088-912816 (Counterclockwise)

Preceding gene: 28572946

Following gene: 28572944

Centisome position: 98.61

GC content: 49.82

Gene sequence:

>273_bases
TTGATTTTGGAGCAATGTTATCCCATGTGGAGCTTCATGCGAAGCATTGATCGGAGTTTTGACCAAAATTGGTTTATGTT
TTATACCTCGGATGAGAGTGGCGTCGCTTACCGCAATCCAATCGGGTTATACAACCACCGGATATGGGGTATTGTGATCG
TTTTGCGCTCCGCCCTGACCCTGCAATCGCCCGGTAAGCCCTGCGGCATATGCTGTCTTTTACCCCAAGGATTGGCAGTC
GCGATTACAGTTGCGAGGCAGGCTATTCGGTGA

Upstream 100 bases:

>100_bases
ATGTGGACTAGCCCCGGGTCCGCGCTGGCATCGTATTCGCGTGTTTGGGTTTCACGTGAAACATGTTGTCTACTGAAAAC
ATGTTGTCTACTGAGGGGTC

Downstream 100 bases:

>100_bases
ATATGAGCCTGCCAGCAGATCGAGATACCGCAAAAAAGCCTAGCGCGCAAAAGCCTAGCGCGCACGCACAGAACGCGACT
GCCGCCGTGGACGTCACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MILEQCYPMWSFMRSIDRSFDQNWFMFYTSDESGVAYRNPIGLYNHRIWGIVIVLRSALTLQSPGKPCGICCLLPQGLAV
AITVARQAIR

Sequences:

>Translated_90_residues
MILEQCYPMWSFMRSIDRSFDQNWFMFYTSDESGVAYRNPIGLYNHRIWGIVIVLRSALTLQSPGKPCGICCLLPQGLAV
AITVARQAIR
>Mature_90_residues
MILEQCYPMWSFMRSIDRSFDQNWFMFYTSDESGVAYRNPIGLYNHRIWGIVIVLRSALTLQSPGKPCGICCLLPQGLAV
AITVARQAIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10287; Mature: 10287

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEQCYPMWSFMRSIDRSFDQNWFMFYTSDESGVAYRNPIGLYNHRIWGIVIVLRSALT
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHH
LQSPGKPCGICCLLPQGLAVAITVARQAIR
CCCCCCCCEEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MILEQCYPMWSFMRSIDRSFDQNWFMFYTSDESGVAYRNPIGLYNHRIWGIVIVLRSALT
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHH
LQSPGKPCGICCLLPQGLAVAITVARQAIR
CCCCCCCCEEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA