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The map label for this gene is ccsB [H]

Identifier: 28572911

GI number: 28572911

Start: 866473

End: 868056

Strand: Direct

Name: ccsB [H]

Synonym: TW770

Alternate gene names: 28572911

Gene position: 866473-868056 (Clockwise)

Preceding gene: 28572910

Following gene: 28572912

Centisome position: 93.58

GC content: 44.89

Gene sequence:

>1584_bases
ATGAGGGTTGCGCTGATTCTGTTGCTAATGCTTGCGTTGGCAGCTGTACCCGGTTCCCTCATACCGCAAACAGACTCTGA
CCCAAACGGGGTTGCGCGTTTCAAAAAGAACAATCCTGAGCTTATTGGCATAGTAAATTTTCTTCAATTATTCGACGTCT
ATAGTTCGGTTTGGTTCTCAAGTATATACATTCTGCTTTTTGTGTCGCTTATAGGGTGCATAGTGGCAAGAACGGGGGTG
TATATAAAAACCTTAAAGATACCCCCGGGAAAGACTCCGAAACGGCTCGACAGAATGCCCGTCTTTCACCAATACCGGTA
CACCGTCACACACTCCACAGAATGTCATCGCGGGAGGGCTGAATCCCATGAGTCGGAGTCTCAGGTATGTCATTGTCATC
AGACGTCCACCCTAATCCTGGAGATCGCCAAGAAAGTTTTGAAAAAATCCCTGCACAGGGTGTCAGTGTATGGCAATAGC
GTTTCTGCTGAAAAAGGGTATTTCAAGGAAGTTGCAAACCTTACCTTTCATATGGCCCTACTATTGCTAGTCATCCTGGT
TGGCTTTGGTGGCTTATACGGATTTAGAGGCCAGCGCATAGTAACTGTTGGCAACAGTTTTGCAAACATAATCGGGGACT
TTGACACATTGCATCCTGGACGACTATTCGATGGTTCACTACTGCCAAAGTACCGAATGGTACTGGATAAATTTACCGTG
CAATATAGCCAAGATACGAGAGATATAAACAAATTTGGCGCCCCGCTTGACTATCAGGCTCATGTTTCAGTTATCTGGCA
AAACGGGAATACAGAGAGAAAGATAATAAGAGTAAACGATCCCTTGCGGATCGGTAGTGAAAATATTTATCTCCTTGGTA
ATGGATATGCGCCTCGTATACGTGTGCGTAATACCTCAGGTAAAGTCGTTTTCGATGAGCAGGTGCCATTTATCCCCCAG
GATAGAAATATGACAAGCCTCGGGGTGATAAAAATACACCAGGGGCTAGCGCAGCAGCTCGGTATGATCGGTTTCTTTTA
CCCCACACAAGGGGCAAAGACAATGCCGTTTTTCTCGATATATCCAGATTTGACGTATCCAGTTCTGACCCTAAATATCT
ATGAGGGAAAACTAAGCGAGGGGGACTCCGTATATACCCTTAATACAGATTCGCTAAAAGAAATTGCTGGAGGCAACAGC
GGTAAAAAGTCTATAACCCTTATGCCTGGACAGTCAGATAAACTACCGGGCGATCTTGGCAGAATTGAGTTTGTTAACAT
AGCTCCGGACCCATACGGATATAAAAACTCTGTTGCGCGTTTTGTTGGGCTTGATATTCACTTTGCACCTTTCAATGGAT
ACATATTTCTTGCGGCTCTTTTAGCACTTGGATCGCTCGTTCCGGCGTTATTTATACAAAGACGGAGATTGTGGGTTCGC
GTTGCTAACAATGCCGTAGAGATTGCTGGACTAACAAGGGGTGATGAGGCAATTCCAGATAAATTTGTGAAGGCATTTAT
GGGCAAATTTCTCGCTCAGCTAGAATCAGCAAATGTTAGACTTAGGGGGTCGCATACTGGATAG

Upstream 100 bases:

>100_bases
ATGCTGACAGGTGTGTGGGCTATCCTGATGCACTTAATCCAGGAATCATTCGGCTACGATGCTCCGCTCTAGTCTCTGGC
TTTGGAGGCAACTCACAAGT

Downstream 100 bases:

>100_bases
GTTTTTATGGATTTTGATCGTTATTCCCTGTTTTTTTTGGCCTCTGCTCTCCCTATTTACACCCTTGGCTTTATTGCCTA
CACTGTCGCGTTTGTCCAGT

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MRVALILLLMLALAAVPGSLIPQTDSDPNGVARFKKNNPELIGIVNFLQLFDVYSSVWFSSIYILLFVSLIGCIVARTGV
YIKTLKIPPGKTPKRLDRMPVFHQYRYTVTHSTECHRGRAESHESESQVCHCHQTSTLILEIAKKVLKKSLHRVSVYGNS
VSAEKGYFKEVANLTFHMALLLLVILVGFGGLYGFRGQRIVTVGNSFANIIGDFDTLHPGRLFDGSLLPKYRMVLDKFTV
QYSQDTRDINKFGAPLDYQAHVSVIWQNGNTERKIIRVNDPLRIGSENIYLLGNGYAPRIRVRNTSGKVVFDEQVPFIPQ
DRNMTSLGVIKIHQGLAQQLGMIGFFYPTQGAKTMPFFSIYPDLTYPVLTLNIYEGKLSEGDSVYTLNTDSLKEIAGGNS
GKKSITLMPGQSDKLPGDLGRIEFVNIAPDPYGYKNSVARFVGLDIHFAPFNGYIFLAALLALGSLVPALFIQRRRLWVR
VANNAVEIAGLTRGDEAIPDKFVKAFMGKFLAQLESANVRLRGSHTG

Sequences:

>Translated_527_residues
MRVALILLLMLALAAVPGSLIPQTDSDPNGVARFKKNNPELIGIVNFLQLFDVYSSVWFSSIYILLFVSLIGCIVARTGV
YIKTLKIPPGKTPKRLDRMPVFHQYRYTVTHSTECHRGRAESHESESQVCHCHQTSTLILEIAKKVLKKSLHRVSVYGNS
VSAEKGYFKEVANLTFHMALLLLVILVGFGGLYGFRGQRIVTVGNSFANIIGDFDTLHPGRLFDGSLLPKYRMVLDKFTV
QYSQDTRDINKFGAPLDYQAHVSVIWQNGNTERKIIRVNDPLRIGSENIYLLGNGYAPRIRVRNTSGKVVFDEQVPFIPQ
DRNMTSLGVIKIHQGLAQQLGMIGFFYPTQGAKTMPFFSIYPDLTYPVLTLNIYEGKLSEGDSVYTLNTDSLKEIAGGNS
GKKSITLMPGQSDKLPGDLGRIEFVNIAPDPYGYKNSVARFVGLDIHFAPFNGYIFLAALLALGSLVPALFIQRRRLWVR
VANNAVEIAGLTRGDEAIPDKFVKAFMGKFLAQLESANVRLRGSHTG
>Mature_527_residues
MRVALILLLMLALAAVPGSLIPQTDSDPNGVARFKKNNPELIGIVNFLQLFDVYSSVWFSSIYILLFVSLIGCIVARTGV
YIKTLKIPPGKTPKRLDRMPVFHQYRYTVTHSTECHRGRAESHESESQVCHCHQTSTLILEIAKKVLKKSLHRVSVYGNS
VSAEKGYFKEVANLTFHMALLLLVILVGFGGLYGFRGQRIVTVGNSFANIIGDFDTLHPGRLFDGSLLPKYRMVLDKFTV
QYSQDTRDINKFGAPLDYQAHVSVIWQNGNTERKIIRVNDPLRIGSENIYLLGNGYAPRIRVRNTSGKVVFDEQVPFIPQ
DRNMTSLGVIKIHQGLAQQLGMIGFFYPTQGAKTMPFFSIYPDLTYPVLTLNIYEGKLSEGDSVYTLNTDSLKEIAGGNS
GKKSITLMPGQSDKLPGDLGRIEFVNIAPDPYGYKNSVARFVGLDIHFAPFNGYIFLAALLALGSLVPALFIQRRRLWVR
VANNAVEIAGLTRGDEAIPDKFVKAFMGKFLAQLESANVRLRGSHTG

Specific function: Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccs1/ccsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 58613; Mature: 58613

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVALILLLMLALAAVPGSLIPQTDSDPNGVARFKKNNPELIGIVNFLQLFDVYSSVWFS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
SIYILLFVSLIGCIVARTGVYIKTLKIPPGKTPKRLDRMPVFHQYRYTVTHSTECHRGRA
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEEEECCCHHCCCCC
ESHESESQVCHCHQTSTLILEIAKKVLKKSLHRVSVYGNSVSAEKGYFKEVANLTFHMAL
CCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHH
LLLVILVGFGGLYGFRGQRIVTVGNSFANIIGDFDTLHPGRLFDGSLLPKYRMVLDKFTV
HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QYSQDTRDINKFGAPLDYQAHVSVIWQNGNTERKIIRVNDPLRIGSENIYLLGNGYAPRI
EECCCHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEECCCCEECCCCEEEEECCCCCEE
RVRNTSGKVVFDEQVPFIPQDRNMTSLGVIKIHQGLAQQLGMIGFFYPTQGAKTMPFFSI
EEECCCCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEE
YPDLTYPVLTLNIYEGKLSEGDSVYTLNTDSLKEIAGGNSGKKSITLMPGQSDKLPGDLG
CCCCCCEEEEEEEEECCCCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
RIEFVNIAPDPYGYKNSVARFVGLDIHFAPFNGYIFLAALLALGSLVPALFIQRRRLWVR
CEEEEEECCCCCCCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
VANNAVEIAGLTRGDEAIPDKFVKAFMGKFLAQLESANVRLRGSHTG
EECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure
MRVALILLLMLALAAVPGSLIPQTDSDPNGVARFKKNNPELIGIVNFLQLFDVYSSVWFS
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHH
SIYILLFVSLIGCIVARTGVYIKTLKIPPGKTPKRLDRMPVFHQYRYTVTHSTECHRGRA
HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCCEEEEEEEEECCCHHCCCCC
ESHESESQVCHCHQTSTLILEIAKKVLKKSLHRVSVYGNSVSAEKGYFKEVANLTFHMAL
CCCCCHHHHEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHH
LLLVILVGFGGLYGFRGQRIVTVGNSFANIIGDFDTLHPGRLFDGSLLPKYRMVLDKFTV
HHHHHHHHCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
QYSQDTRDINKFGAPLDYQAHVSVIWQNGNTERKIIRVNDPLRIGSENIYLLGNGYAPRI
EECCCHHHHHHHCCCCCCEEEEEEEEECCCCCEEEEEECCCCEECCCCEEEEECCCCCEE
RVRNTSGKVVFDEQVPFIPQDRNMTSLGVIKIHQGLAQQLGMIGFFYPTQGAKTMPFFSI
EEECCCCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEE
YPDLTYPVLTLNIYEGKLSEGDSVYTLNTDSLKEIAGGNSGKKSITLMPGQSDKLPGDLG
CCCCCCEEEEEEEEECCCCCCCEEEEECCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
RIEFVNIAPDPYGYKNSVARFVGLDIHFAPFNGYIFLAALLALGSLVPALFIQRRRLWVR
CEEEEEECCCCCCCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
VANNAVEIAGLTRGDEAIPDKFVKAFMGKFLAQLESANVRLRGSHTG
EECCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA