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The map label for this gene is 28572898

Identifier: 28572898

GI number: 28572898

Start: 853877

End: 854614

Strand: Reverse

Name: 28572898

Synonym: TW757

Alternate gene names: NA

Gene position: 854614-853877 (Counterclockwise)

Preceding gene: 28572899

Following gene: 28572896

Centisome position: 92.3

GC content: 45.66

Gene sequence:

>738_bases
TTGCGTTTGTTCTGCCCTCGCGGGCGTTTTTTCAGAAATACTGCCTGCATTGCACCCAATCTACTTAAGGTTTCACTGAT
AACTGCTTTTTATTGCATCGAGCAAATTCCGTGTATATTGTTAGCCTTTTTTAGGAGTCTTCCTGACCTTCCGGCTCGGA
CCACACATTTATTGGTAAATCTTCTAAAAGTTCATGCGACATTTGTTTCTCTTGTAAAAAAGATAGTTGACGCGCCGCCA
AGGGCTATTACCCCATCGCTTGTCGCGGTTTTACTATCTTTTTCTTTCTGGCTATTATTCGCCTTTTTTGGCCCCCTGGA
TCCGTATCAAGACAAAGTCGCGTTCTTGACAGGCCTTGTTACACTCCGACTAAATGGATTTGCGTTTATTTTTCTTGCAA
TTCATATTTTTCTTGAGATTTACTTGTGGCTTGGTCTACGCGTTGCGTATTTTCGGGGATATTTATTGCAGTACAGGTCG
CTAAGGGCCCTGGCGCTTAGCGCGACAGGGCTTCTGTGGATTAGTTTAATCCTTTGGATTGCGCTACTTGTCTCCTCTCT
TATCACTCCCCCGGTTATCCCCGCGAGGGATGTTGCGATGGCCGTTTTGCTCTTTGCGCTCGGTCTGCGACATTTTGTCA
TAACGCCTCTCTTTTCCGGAAGGCTTGTCATTAAGAAGCGGGAGAATCCTCCCAAGGCCTGCCTTGAAGCAGATAAAACT
AACGCAGCTCGATCATAA

Upstream 100 bases:

>100_bases
CTGCGTCTTTTGACCTGTCTGGGGGCGCTGTGAATGCCCAGGTGTGCTCCTGAGTAATCTGCGTCGCGTATCAGATGCTT
CCGGAAAGGGCCGAAATGCA

Downstream 100 bases:

>100_bases
CGGGCACATGATCGCTTGGAGTTTTACCCTCATCTCCTTTTCGTTGCTCGTGATGTATTTTTGCAAACCTTACGCTGTTC
GCAATTGGGTCGGTTCCCAG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRLFCPRGRFFRNTACIAPNLLKVSLITAFYCIEQIPCILLAFFRSLPDLPARTTHLLVNLLKVHATFVSLVKKIVDAPP
RAITPSLVAVLLSFSFWLLFAFFGPLDPYQDKVAFLTGLVTLRLNGFAFIFLAIHIFLEIYLWLGLRVAYFRGYLLQYRS
LRALALSATGLLWISLILWIALLVSSLITPPVIPARDVAMAVLLFALGLRHFVITPLFSGRLVIKKRENPPKACLEADKT
NAARS

Sequences:

>Translated_245_residues
MRLFCPRGRFFRNTACIAPNLLKVSLITAFYCIEQIPCILLAFFRSLPDLPARTTHLLVNLLKVHATFVSLVKKIVDAPP
RAITPSLVAVLLSFSFWLLFAFFGPLDPYQDKVAFLTGLVTLRLNGFAFIFLAIHIFLEIYLWLGLRVAYFRGYLLQYRS
LRALALSATGLLWISLILWIALLVSSLITPPVIPARDVAMAVLLFALGLRHFVITPLFSGRLVIKKRENPPKACLEADKT
NAARS
>Mature_245_residues
MRLFCPRGRFFRNTACIAPNLLKVSLITAFYCIEQIPCILLAFFRSLPDLPARTTHLLVNLLKVHATFVSLVKKIVDAPP
RAITPSLVAVLLSFSFWLLFAFFGPLDPYQDKVAFLTGLVTLRLNGFAFIFLAIHIFLEIYLWLGLRVAYFRGYLLQYRS
LRALALSATGLLWISLILWIALLVSSLITPPVIPARDVAMAVLLFALGLRHFVITPLFSGRLVIKKRENPPKACLEADKT
NAARS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27546; Mature: 27546

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS00041 HTH_ARAC_FAMILY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFCPRGRFFRNTACIAPNLLKVSLITAFYCIEQIPCILLAFFRSLPDLPARTTHLLVN
CCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LLKVHATFVSLVKKIVDAPPRAITPSLVAVLLSFSFWLLFAFFGPLDPYQDKVAFLTGLV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TLRLNGFAFIFLAIHIFLEIYLWLGLRVAYFRGYLLQYRSLRALALSATGLLWISLILWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLVSSLITPPVIPARDVAMAVLLFALGLRHFVITPLFSGRLVIKKRENPPKACLEADKT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCC
NAARS
CCCCC
>Mature Secondary Structure
MRLFCPRGRFFRNTACIAPNLLKVSLITAFYCIEQIPCILLAFFRSLPDLPARTTHLLVN
CCCCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LLKVHATFVSLVKKIVDAPPRAITPSLVAVLLSFSFWLLFAFFGPLDPYQDKVAFLTGLV
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TLRLNGFAFIFLAIHIFLEIYLWLGLRVAYFRGYLLQYRSLRALALSATGLLWISLILWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALLVSSLITPPVIPARDVAMAVLLFALGLRHFVITPLFSGRLVIKKRENPPKACLEADKT
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCC
NAARS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA