The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572876

Identifier: 28572876

GI number: 28572876

Start: 829742

End: 830185

Strand: Reverse

Name: 28572876

Synonym: TW735

Alternate gene names: NA

Gene position: 830185-829742 (Counterclockwise)

Preceding gene: 28572877

Following gene: 28572875

Centisome position: 89.66

GC content: 47.07

Gene sequence:

>444_bases
GTGCTCGATTTATTCAAAATGCCCTTGGGGTCACAAATTTTCTCTGACACAAAACTTGTTTCGCGCGACGATCTCGTACG
TTATGCCGCTGCAAGCGGTGACTTCAATCCAATTCACTACCGTGATGACTTTGCCAGGGCCGTCGGGCTTCCTGGTGTTA
TATGCCATGGAATGCTGACAATGGCTTTGGCAATTGCCCCTCTTATGACCCAGCTGGGCACCGATGTCTCTAGACTGTCT
TCCTATGGCGTACGCTTCTCAAAACCTGTTCCCGTCCCAGTCGGTAAAAACCCACTTGATGAACAATCCGTCGGAGCCTT
GTTATCGATAAAAGCTTTTCTGAGAAAGCGGGAGGATAGCAAAGCTATTATTGAGCTCATTGTGTCTCTGGATGATGAAA
CCGTCCTCACAAAGGCCTTTGCGGAAATATCACTAAAAATATAA

Upstream 100 bases:

>100_bases
GGGGAGATCTTCGTGGGCTGCCTATCAAGGAGAGGAAATGAGTGGGGTAAATCCACAGACCGGACCAAATTGCGCTCTGC
CAGAAGGGATGTCAAGTTAG

Downstream 100 bases:

>100_bases
AAACCTGCGAAACACTATATATAGTAGTTTGACTTCTGCGTAGGCACATTATATACTGATAATCAGATGCGCTCGTGCCC
TGTTTTTGGGGCTTGTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: MaoC Domain Protein Dehydratase; MaoC Domain-Containing Protein Dehydratase; Acyl Dehydratase; MaoC-Like Dehydratase; MaoC Family Protein; MaoC Like Domain-Containing Protein; MaoC-Like Domain-Containing Protein; R_hydratase_like -Hydratase

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLDLFKMPLGSQIFSDTKLVSRDDLVRYAAASGDFNPIHYRDDFARAVGLPGVICHGMLTMALAIAPLMTQLGTDVSRLS
SYGVRFSKPVPVPVGKNPLDEQSVGALLSIKAFLRKREDSKAIIELIVSLDDETVLTKAFAEISLKI

Sequences:

>Translated_147_residues
MLDLFKMPLGSQIFSDTKLVSRDDLVRYAAASGDFNPIHYRDDFARAVGLPGVICHGMLTMALAIAPLMTQLGTDVSRLS
SYGVRFSKPVPVPVGKNPLDEQSVGALLSIKAFLRKREDSKAIIELIVSLDDETVLTKAFAEISLKI
>Mature_147_residues
MLDLFKMPLGSQIFSDTKLVSRDDLVRYAAASGDFNPIHYRDDFARAVGLPGVICHGMLTMALAIAPLMTQLGTDVSRLS
SYGVRFSKPVPVPVGKNPLDEQSVGALLSIKAFLRKREDSKAIIELIVSLDDETVLTKAFAEISLKI

Specific function: Unknown

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16038; Mature: 16038

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLFKMPLGSQIFSDTKLVSRDDLVRYAAASGDFNPIHYRDDFARAVGLPGVICHGMLT
CCCCCCCCCCCHHHHCCHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
MALAIAPLMTQLGTDVSRLSSYGVRFSKPVPVPVGKNPLDEQSVGALLSIKAFLRKREDS
HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
KAIIELIVSLDDETVLTKAFAEISLKI
HHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLDLFKMPLGSQIFSDTKLVSRDDLVRYAAASGDFNPIHYRDDFARAVGLPGVICHGMLT
CCCCCCCCCCCHHHHCCHHHCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
MALAIAPLMTQLGTDVSRLSSYGVRFSKPVPVPVGKNPLDEQSVGALLSIKAFLRKREDS
HHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
KAIIELIVSLDDETVLTKAFAEISLKI
HHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA