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The map label for this gene is recR

Identifier: 28572867

GI number: 28572867

Start: 821589

End: 822185

Strand: Reverse

Name: recR

Synonym: TW726

Alternate gene names: 28572867

Gene position: 822185-821589 (Counterclockwise)

Preceding gene: 28572868

Following gene: 28572866

Centisome position: 88.79

GC content: 47.91

Gene sequence:

>597_bases
ATGTATGTTCGCATAGTTCAGGATCTAATACGTGAGCTTGGCAAGCTACCCGGCATAGGTCCGAAGTCTGCACAGCGCAT
TGCCTTCTTCATTTTGCAGAACCCGAGTTTTGATATCGACAGGCTATCTGAGACTCTCCAGTCTGTTAGAAAACAGGTGC
AGTTCTGTAAGGTTTGTGGCAATTTCTCGGAAGAAGATGAGTGTGTAATTTGCTCGGATCCGAGGCGTGATAGGGGGGTA
ATTTGCGTTGTTGAAGAGCCAAAGGATGTTGTTGCAATAGAGAAAACGCGCGAATTTTCTGGGCTGTACCATGTTCTGGG
GGGTGCAATCAGCCCAATAGATGGGGTAGGCCCCGATGACCTTAACATAAGACAGCTTTTACAGCGGCTGGCTGATGGAA
CAATAACAGAGGTTGTTCTGGCGACAGACCCAAATATGGAAGGCGAGGCGACGGCAAGCTATATAGCAAGGGTCATTTCA
GCTATGCGAATAAGAGTTTCTAAACTTGCCTCAGGCCTCCCGGTTGGAAGTGATCTTGAATACGCGGACGAAATTACCCT
CGGTAGGGCGCTCGAGGGTAGGCAATATATAAATTAA

Upstream 100 bases:

>100_bases
CAGAAACAAAGGAAAAACCTGATAACCCAATTACGGGGGAGGCTGTTCTGGTGCAGGCTGGTGCAAAACTTATCTCAGAA
GAGGAGCAGTAGCTTAGAGA

Downstream 100 bases:

>100_bases
CCATTTACGATGTACAATTAGTTTGCCTCCGCGCGGCGTTACCCGGGTGAACTCCCCCAGGTTAGGAATAAAGCAAGGGT
AGCTCGGCTCTGGCGGGTGT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MYVRIVQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCGNFSEEDECVICSDPRRDRGV
ICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDDLNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVIS
AMRIRVSKLASGLPVGSDLEYADEITLGRALEGRQYIN

Sequences:

>Translated_198_residues
MYVRIVQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCGNFSEEDECVICSDPRRDRGV
ICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDDLNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVIS
AMRIRVSKLASGLPVGSDLEYADEITLGRALEGRQYIN
>Mature_198_residues
MYVRIVQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCGNFSEEDECVICSDPRRDRGV
ICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDDLNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVIS
AMRIRVSKLASGLPVGSDLEYADEITLGRALEGRQYIN

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=194, Percent_Identity=48.4536082474227, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_TROW8 (Q83N83)

Other databases:

- EMBL:   BX251412
- RefSeq:   NP_789647.1
- ProteinModelPortal:   Q83N83
- SMR:   Q83N83
- STRING:   Q83N83
- GeneID:   1064926
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW726
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q83N83
- ProtClustDB:   PRK00076
- BioCyc:   TWHI218496:TW0692-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21840; Mature: 21840

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVRIVQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCG
CHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
NFSEEDECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDD
CCCCCCCEEEECCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLE
CCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YADEITLGRALEGRQYIN
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYVRIVQDLIRELGKLPGIGPKSAQRIAFFILQNPSFDIDRLSETLQSVRKQVQFCKVCG
CHHHHHHHHHHHHHCCCCCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHC
NFSEEDECVICSDPRRDRGVICVVEEPKDVVAIEKTREFSGLYHVLGGAISPIDGVGPDD
CCCCCCCEEEECCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LNIRQLLQRLADGTITEVVLATDPNMEGEATASYIARVISAMRIRVSKLASGLPVGSDLE
CCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YADEITLGRALEGRQYIN
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12606174