The gene/protein map for NC_004551 is currently unavailable.
Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is znuB [C]

Identifier: 28572828

GI number: 28572828

Start: 775284

End: 776138

Strand: Direct

Name: znuB [C]

Synonym: TW687

Alternate gene names: 28572828

Gene position: 775284-776138 (Clockwise)

Preceding gene: 28572827

Following gene: 28572829

Centisome position: 83.73

GC content: 45.26

Gene sequence:

>855_bases
GTGATTGATTATCTACTTGCTCCTTTCGAGTACGGGTTCATGCTGCGTGCCTTTATTGTTGTCATTGTGTCAGCAACCCT
GTGCGGCCTCATATCGTGTTGGGTGGTTCTTCTTGGCTGGTCGATGCTCGGTGAGGCAATTTCACACGCGATATTTCCCG
GAGTTGTCCTAAGCTTCCTCCTTGGCGTGCCATTTGCCATTGGCGCTTTTGTATCCGGCCTTGTGGCAGTGTATCTAATC
GGCCACCTGAGAAGTAACCCTAGGATCAAAGAGGATGCTGCGATGGGTGTTGTGTTCATAACCATGTTCTCGCTTGGCCT
AATCTTAGTTTTCTTTATTCCAGGCAAAGGTCATCTTATGCATATATTGTTCGGCAACTTGCTAAGTGTTACATATCTGG
ATCTGTATCAGGTAATAATCCTTGGTGTGCTTGGGATATCGATCCTAACTTATAGGCGAAGGGATTTTACCCTGTACGCA
TTCGACCCCGGACACGCGAATGTCATTGGTATATCCACCAGATCACTTCACAATATATTTCTTATAACCCTAGCGTTCAC
AATTGTTGTCTCGGTACAGCAAGTCGGTGTGGTTCTTGTTGTTGCTATGTTGGTCATACCGGGCGTCTCGGCAAGTCTGC
TTAGCAGAAAAATATCAAGAATGTTTATCATATCTCCCGTCATGGCTGTTACAACTTCTGTAGCTGGTGTTTACATAAGC
TACACATTTGACTTACCACCGGGATCGGTGATTGTCTTGGTTATGGGATCAGTGTTCGTTCTCACATACACTGTAACGAG
TATCATGTCAATGATTGTGAGCAATAGAACTCTGTTGAGGACAAGACACGGGTAA

Upstream 100 bases:

>100_bases
TCGCGGATGGTAGCAACTGACGGGATGTGTTGCGCTGTTGTGACCCTGTTGCGTGCGATATGCCCGTCCCGTGTCTCTCT
GACCTTTCGGCGGGGTATCT

Downstream 100 bases:

>100_bases
CACTGGTGTTCTAGTATTTATGGATTGCGTCATGCAATGAGGTTTGCTATGCTTATCACCGGTTATTTAAGAGGGAATGG
GGTGATTAGTTAAATTGATG

Product: ABC transporter integral membrane subunit

Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFLLGVPFAIGAFVSGLVAVYLI
GHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLMHILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYA
FDPGHANVIGISTRSLHNIFLITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS
YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG

Sequences:

>Translated_284_residues
MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFLLGVPFAIGAFVSGLVAVYLI
GHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLMHILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYA
FDPGHANVIGISTRSLHNIFLITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS
YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG
>Mature_284_residues
MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFLLGVPFAIGAFVSGLVAVYLI
GHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLMHILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYA
FDPGHANVIGISTRSLHNIFLITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS
YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG

Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron (Potential) [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1788166, Length=264, Percent_Identity=28.4090909090909, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 30869; Mature: 30869

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFL
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVPFAIGAFVSGLVAVYLIGHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
HILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYAFDPGHANVIGISTRSLHNIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEEECHHHHHHHH
LITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFL
CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGVPFAIGAFVSGLVAVYLIGHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
HILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYAFDPGHANVIGISTRSLHNIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEEECHHHHHHHH
LITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Zn (II) [Periplasm]; H2O; ATP [C]

Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]