Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572821

Identifier: 28572821

GI number: 28572821

Start: 769353

End: 769517

Strand: Reverse

Name: 28572821

Synonym: TW680

Alternate gene names: NA

Gene position: 769517-769353 (Counterclockwise)

Preceding gene: 28572822

Following gene: 28572820

Centisome position: 83.11

GC content: 44.85

Gene sequence:

>165_bases
GTGGACTGGCTTGACCAATCAATGCTTTGCATTTGGTGTACATTAGACCGTGTGAACGGCATGTCGCTTGTATCCCTTGA
AATGCTGTGTGTGGGCATCCTGGTACTTATTACTCTTGCCATTGCATATGCTGCCATTTCTGTCTTGGTAAGACTCTTTA
GGTAA

Upstream 100 bases:

>100_bases
GACCATTGGCCTTTGGTAGTTGCATTATTTACTTTGCATCTGTTCTGATCTTCGGCGTCTTTCTATAACAATTGTTGTCG
AATTATTCCGTACTGTTGTG

Downstream 100 bases:

>100_bases
AAGGTCGATGTTTAGCTGACTCTTGATGTTCTTGAATCTGGATACAGCAGTTCCGTTTCGGATTGCACGGAGAGTATTGG
CTGTTACCCTTGTTGCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 54; Mature: 54

Protein sequence:

>54_residues
MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR

Sequences:

>Translated_54_residues
MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR
>Mature_54_residues
MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6075; Mature: 6075

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
7.4 %Met     (Translated Protein)
13.0 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
13.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA