Click here to switch to the map view.

The map label for this gene is 28572822

Identifier: 28572822

GI number: 28572822

Start: 769550

End: 770104

Strand: Reverse

Name: 28572822

Synonym: TW681

Alternate gene names: NA

Gene position: 770104-769550 (Counterclockwise)

Preceding gene: 28572830

Following gene: 28572821

Centisome position: 83.17

GC content: 47.21

Gene sequence:

>555_bases
TTGGGGGTTGCACTGCAGAAGGGTGCCGTTAGGTTCATCGCGATTACAGCTTGTGGGATAGTAGGTGTCGCCCTTAGCTT
ACTCGTCACGCTTGAAAAGATAGCTGTTCTGGGCGATCCCCACCATGTGCCCGCCTGTTCTTTGAGCAAGCTCGTCAATT
GTCTTTCCGTTTTGGATTCTCCCGAGGCTTCCTTATTCTTCGGTATTCCGAATTCACTAATTGGACTTATTGGCTTTTCT
GTTGTTACCAGTTTTGGCGTTTTTGGGATCGCATTTGGCACCTTTCCCCAATGGCTCTGGACTTGCTTCACCGTTGGTAT
GCTTTCCGCGACGTTGTTCTGCATTTTCTTATCGTATGTTTCGTCATTTCTGATTGGAGCTGTGTGTTTGTATTGTGTTG
GCGTGTGGGTTGTCAGCAGCCTGGGTTTTGCACTTGGCCTTTCGCCGACTTTACACAATACAAGGTTCGCGATTCTTTGC
GGTTATGGACCATTGGCCTTTGGTAGTTGCATTATTTACTTTGCATCTGTTCTGATCTTCGGCGTCTTTCTATAA

Upstream 100 bases:

>100_bases
GACAAGCAGTTTTTCAGACAATGACATTTAACATCAATGGTATTCGATATTGTTCCGTGTTTAGAGTCTCGTATTAGAAT
CATCTGGTAGGCGATCTTGG

Downstream 100 bases:

>100_bases
CAATTGTTGTCGAATTATTCCGTACTGTTGTGGTGGACTGGCTTGACCAATCAATGCTTTGCATTTGGTGTACATTAGAC
CGTGTGAACGGCATGTCGCT

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Integral Membrane Oxidoreductase; Conserved Membrane Protein

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MGVALQKGAVRFIAITACGIVGVALSLLVTLEKIAVLGDPHHVPACSLSKLVNCLSVLDSPEASLFFGIPNSLIGLIGFS
VVTSFGVFGIAFGTFPQWLWTCFTVGMLSATLFCIFLSYVSSFLIGAVCLYCVGVWVVSSLGFALGLSPTLHNTRFAILC
GYGPLAFGSCIIYFASVLIFGVFL

Sequences:

>Translated_184_residues
MGVALQKGAVRFIAITACGIVGVALSLLVTLEKIAVLGDPHHVPACSLSKLVNCLSVLDSPEASLFFGIPNSLIGLIGFS
VVTSFGVFGIAFGTFPQWLWTCFTVGMLSATLFCIFLSYVSSFLIGAVCLYCVGVWVVSSLGFALGLSPTLHNTRFAILC
GYGPLAFGSCIIYFASVLIFGVFL
>Mature_183_residues
GVALQKGAVRFIAITACGIVGVALSLLVTLEKIAVLGDPHHVPACSLSKLVNCLSVLDSPEASLFFGIPNSLIGLIGFSV
VTSFGVFGIAFGTFPQWLWTCFTVGMLSATLFCIFLSYVSSFLIGAVCLYCVGVWVVSSLGFALGLSPTLHNTRFAILCG
YGPLAFGSCIIYFASVLIFGVFL

Specific function: Unknown

COG id: COG4243

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19350; Mature: 19219

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVALQKGAVRFIAITACGIVGVALSLLVTLEKIAVLGDPHHVPACSLSKLVNCLSVLDS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PEASLFFGIPNSLIGLIGFSVVTSFGVFGIAFGTFPQWLWTCFTVGMLSATLFCIFLSYV
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSFLIGAVCLYCVGVWVVSSLGFALGLSPTLHNTRFAILCGYGPLAFGSCIIYFASVLIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
GVFL
HHCC
>Mature Secondary Structure 
GVALQKGAVRFIAITACGIVGVALSLLVTLEKIAVLGDPHHVPACSLSKLVNCLSVLDS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
PEASLFFGIPNSLIGLIGFSVVTSFGVFGIAFGTFPQWLWTCFTVGMLSATLFCIFLSYV
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSFLIGAVCLYCVGVWVVSSLGFALGLSPTLHNTRFAILCGYGPLAFGSCIIYFASVLIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
GVFL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA