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The map label for this gene is sgaU [H]

Identifier: 28572811

GI number: 28572811

Start: 761688

End: 762542

Strand: Reverse

Name: sgaU [H]

Synonym: TW670

Alternate gene names: 28572811

Gene position: 762542-761688 (Counterclockwise)

Preceding gene: 28572812

Following gene: 28572810

Centisome position: 82.35

GC content: 50.29

Gene sequence:

>855_bases
GTGTCAATAGAGATTGGTATATACGAGAAGGCGATTAGACGGCGTGAGACCTGGAGTGAGTTTTTTGCAGCCGCTGCTGC
TGCAGGATTTGCGTTTGTTGATCTGTCTGTCGACGAAAGTGATGAAAGAATAGAGCGCCTCACTTGGCCTGATACCAGAA
GATGCGAACTTAGGGCCGCTGCTAACCGTGAAGGTATTGCCCTCGGCGGTATATGCCTTTCTGTTCACAGGAAGATTGCC
CCGGCCAGCCAAGACGCTGCCGTGCGCGATAGGGCCCGCCTGTTTCTCCGTCAAGGTGTTGATTTGTGCTCTAGTCTTGG
TATCCCGATTCTGCAGTTGGCTGGTTACTATGATTACTATGGGATGCCGCATCCCGATTCGCGAAAGCTGTTTATAGATT
TTTTACACTATTCTGCTGCCTATGCGTCTTTGAACGGGGTCGTTCTTGGTGTTGAGAATGTGGATACAAATGGGATAACC
TCGATTATTTCAGGCAGGGAGGCTGTTGAACAGGTGGGATCTCCTTGGCTTAAGTTGTATCCTGATATAGGTAATTTGAC
CGAGCGACAATTGAGTACTCGGCAGGAACTTGCAGCTGGTAGAGGATTTATGTTTGCTTTACATGCGAAGGATACTCGTC
CCGGTGAACCTCGTCGTGTCCCGATGGGTTGTGGGCATGTTCCGTGGAAAGAGGCCTTTGATGAGCTGCATCGTCAAAAC
TGGTCCGGACGAATGATGATAGAGATGTGGAATGATGACAGTCCTGACTCTGAGCGCATTGCCTCGCGCGCTCGGGAGTT
CATAACTGCACGGCTCGGTGAGTCTGGTATCGCTGTTGTCTCTAAGGCATGTTAG

Upstream 100 bases:

>100_bases
GCCATCATTGGCGCAGACTGTCCGTCTTCTGCTGCAAGCAGTTTTCAAAAAGAGATAGGCGAATTGTGGCGCTGAACAGA
GGGGTACTCCGGATTCTGCC

Downstream 100 bases:

>100_bases
AGGATTTGAGGGCTCGCGTTTGCGAGGGTAACCTGCGCCTTCCCAGAGAGGGCTTGGTTACTTGGACCTCCGGTAACTTG
TCTGCGAGAGATCCTGATAC

Product: L-xylulose 5-phosphate 3-epimerase

Products: NA

Alternate protein names: L-ascorbate utilization protein E; L-xylulose-5-phosphate 3-epimerase [H]

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MSIEIGIYEKAIRRRETWSEFFAAAAAAGFAFVDLSVDESDERIERLTWPDTRRCELRAAANREGIALGGICLSVHRKIA
PASQDAAVRDRARLFLRQGVDLCSSLGIPILQLAGYYDYYGMPHPDSRKLFIDFLHYSAAYASLNGVVLGVENVDTNGIT
SIISGREAVEQVGSPWLKLYPDIGNLTERQLSTRQELAAGRGFMFALHAKDTRPGEPRRVPMGCGHVPWKEAFDELHRQN
WSGRMMIEMWNDDSPDSERIASRAREFITARLGESGIAVVSKAC

Sequences:

>Translated_284_residues
MSIEIGIYEKAIRRRETWSEFFAAAAAAGFAFVDLSVDESDERIERLTWPDTRRCELRAAANREGIALGGICLSVHRKIA
PASQDAAVRDRARLFLRQGVDLCSSLGIPILQLAGYYDYYGMPHPDSRKLFIDFLHYSAAYASLNGVVLGVENVDTNGIT
SIISGREAVEQVGSPWLKLYPDIGNLTERQLSTRQELAAGRGFMFALHAKDTRPGEPRRVPMGCGHVPWKEAFDELHRQN
WSGRMMIEMWNDDSPDSERIASRAREFITARLGESGIAVVSKAC
>Mature_283_residues
SIEIGIYEKAIRRRETWSEFFAAAAAAGFAFVDLSVDESDERIERLTWPDTRRCELRAAANREGIALGGICLSVHRKIAP
ASQDAAVRDRARLFLRQGVDLCSSLGIPILQLAGYYDYYGMPHPDSRKLFIDFLHYSAAYASLNGVVLGVENVDTNGITS
IISGREAVEQVGSPWLKLYPDIGNLTERQLSTRQELAAGRGFMFALHAKDTRPGEPRRVPMGCGHVPWKEAFDELHRQNW
SGRMMIEMWNDDSPDSERIASRAREFITARLGESGIAVVSKAC

Specific function: Catalyzes the isomerization of L-xylulose-5-phosphate to L-ribulose-5-phosphate. Is involved in the anaerobic L-ascorbate utilization [H]

COG id: COG3623

COG function: function code G; Putative L-xylulose-5-phosphate 3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HUMPI family [H]

Homologues:

Organism=Escherichia coli, GI1790641, Length=276, Percent_Identity=36.5942028985507, Blast_Score=192, Evalue=2e-50,
Organism=Escherichia coli, GI87082294, Length=280, Percent_Identity=37.8571428571429, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004560
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.1.3.22 [H]

Molecular weight: Translated: 31681; Mature: 31550

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEIGIYEKAIRRRETWSEFFAAAAAAGFAFVDLSVDESDERIERLTWPDTRRCELRAA
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCCCCCCCCEEEEEC
ANREGIALGGICLSVHRKIAPASQDAAVRDRARLFLRQGVDLCSSLGIPILQLAGYYDYY
CCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHCC
GMPHPDSRKLFIDFLHYSAAYASLNGVVLGVENVDTNGITSIISGREAVEQVGSPWLKLY
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCHHHHHHHCCCCEEEC
PDIGNLTERQLSTRQELAAGRGFMFALHAKDTRPGEPRRVPMGCGHVPWKEAFDELHRQN
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
WSGRMMIEMWNDDSPDSERIASRAREFITARLGESGIAVVSKAC
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCC
>Mature Secondary Structure 
SIEIGIYEKAIRRRETWSEFFAAAAAAGFAFVDLSVDESDERIERLTWPDTRRCELRAA
EEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCCCCCCCCEEEEEC
ANREGIALGGICLSVHRKIAPASQDAAVRDRARLFLRQGVDLCSSLGIPILQLAGYYDYY
CCCCCEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHCC
GMPHPDSRKLFIDFLHYSAAYASLNGVVLGVENVDTNGITSIISGREAVEQVGSPWLKLY
CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHCCHHHHHHHCCCCEEEC
PDIGNLTERQLSTRQELAAGRGFMFALHAKDTRPGEPRRVPMGCGHVPWKEAFDELHRQN
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
WSGRMMIEMWNDDSPDSERIASRAREFITARLGESGIAVVSKAC
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA