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The map label for this gene is yafL [C]

Identifier: 28572768

GI number: 28572768

Start: 707270

End: 708502

Strand: Reverse

Name: yafL [C]

Synonym: TW622

Alternate gene names: 28572768

Gene position: 708502-707270 (Counterclockwise)

Preceding gene: 28572769

Following gene: 28572767

Centisome position: 76.52

GC content: 50.04

Gene sequence:

>1233_bases
GTGGGTAGATGTGTTCGTCGATGCTTTATCGTTGCTCTTGTGTCGGTTCTCTGTTCGTCGATGCTTTTTCAGACATCTGT
GGCTGCCGACCCTACGGGCGAACCCGTTCCTCCTGGATATCCGAACTGGAATGATGTGGAGCGCGCGCGACGCAATCAGG
ACGCCAAACGTCGTGAAGTGGAAAATATAACAGGCTTGGTAATGGCCTTGCAGGATAGGGTCAATCAGGCTGTAAGGGCT
GCTGCCATATCTGCTGAACGATACCAAGAGGCAAAGATTAAGCTTGAAGATGCATCGCGCAGATCGAAGTCTTTTGCTGA
GCTTGCAAAAAATAGTTCACTCAAGGCCGACCTGTCGAAAAAGGAGGCTGGCCGAATGATAGCAAATCTTTACAAGCGCG
GTTCCTCTAATATGAGCCTGTTTTTTTCACGCTCTGAAGATCCTGAAAATCTTCTTGAAATGCTAACTCTGATTGATCGT
TTTGGTGGTCATTTTGATGAGGTTTACACGCGCGCAATTAGGGATGCTAATGATTCATCGGCTTTGCGTAAACAGGCCGA
TGCTGCTCATATCGATTTTGAAAAACTTGCTGATGAATCGCAGCGCGCCTACGATGCGGCGCAACATGCAAGACAAGCTG
CAGCCTCGGCTGTAGATGAGCAAAAAGCGAGGAGCAAGGTTCTCCTGGCACAGTTGGCTGTGTTGCAAAATACAACTCAG
GAGGTACAAAAGCGGTACCTCGCCGGCGTACGGGAGAGGCGGGAAAGAGCTGAAGCCGCACGCCGGCGTGCGGCCCTGCG
TGACAAGGGTAATTATGCGGCTGCTACAGCCCTTTTGTCGAATAATCCTCCGAGGTCCTCTGCTGTTGCAAAAGTTCTGA
ATTTTGCCAGGCGTGCAATCAACCTTCCTTATGTATTTGGCGGGACGGGCAATCCCGGTTATGACTGTTCTGGTTTAACT
CTTATGGCTTATAGGGCCGCCGGTATAAATATCGGTTCACACAGTGTTAACAGTCAGTATTACACAGCCCGTGCCAAAGG
CCAGCTTGTCAGTTATGAGAATAGACAGCCCGGAGATCTTCTTTTCTGGGGCAGTGGTCCAGGCAGTTTCTATCACAATG
GCATTTATGTCGGTAATGGAATGATGATTGCGGCTCCTGACTTTGGGGATGTTGTTAAACTACAGCCGGTTTGGGGAATT
CCCTGGCTTCAGGTTGCGCGCCCTGCCCAATAG

Upstream 100 bases:

>100_bases
CATATGTATTATCCACGTATTTATGTATTATCCACATAATAAGGCACAACAGCACTTTTAGGTAATTATCAAGGTAATTA
TTACTATAATTGACTCCGCT

Downstream 100 bases:

>100_bases
AGTTTTGCCCAATGGAATCTTGCTTGTCTCTGCATGTGTTATTTTCTGCAAATCGCCCTGTATCTGTTTTGTCTTGTATC
TGTGTTGTCAGGTCGGCCAT

Product: NLP/P60 family secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGRCVRRCFIVALVSVLCSSMLFQTSVAADPTGEPVPPGYPNWNDVERARRNQDAKRREVENITGLVMALQDRVNQAVRA
AAISAERYQEAKIKLEDASRRSKSFAELAKNSSLKADLSKKEAGRMIANLYKRGSSNMSLFFSRSEDPENLLEMLTLIDR
FGGHFDEVYTRAIRDANDSSALRKQADAAHIDFEKLADESQRAYDAAQHARQAAASAVDEQKARSKVLLAQLAVLQNTTQ
EVQKRYLAGVRERRERAEAARRRAALRDKGNYAAATALLSNNPPRSSAVAKVLNFARRAINLPYVFGGTGNPGYDCSGLT
LMAYRAAGINIGSHSVNSQYYTARAKGQLVSYENRQPGDLLFWGSGPGSFYHNGIYVGNGMMIAAPDFGDVVKLQPVWGI
PWLQVARPAQ

Sequences:

>Translated_410_residues
MGRCVRRCFIVALVSVLCSSMLFQTSVAADPTGEPVPPGYPNWNDVERARRNQDAKRREVENITGLVMALQDRVNQAVRA
AAISAERYQEAKIKLEDASRRSKSFAELAKNSSLKADLSKKEAGRMIANLYKRGSSNMSLFFSRSEDPENLLEMLTLIDR
FGGHFDEVYTRAIRDANDSSALRKQADAAHIDFEKLADESQRAYDAAQHARQAAASAVDEQKARSKVLLAQLAVLQNTTQ
EVQKRYLAGVRERRERAEAARRRAALRDKGNYAAATALLSNNPPRSSAVAKVLNFARRAINLPYVFGGTGNPGYDCSGLT
LMAYRAAGINIGSHSVNSQYYTARAKGQLVSYENRQPGDLLFWGSGPGSFYHNGIYVGNGMMIAAPDFGDVVKLQPVWGI
PWLQVARPAQ
>Mature_409_residues
GRCVRRCFIVALVSVLCSSMLFQTSVAADPTGEPVPPGYPNWNDVERARRNQDAKRREVENITGLVMALQDRVNQAVRAA
AISAERYQEAKIKLEDASRRSKSFAELAKNSSLKADLSKKEAGRMIANLYKRGSSNMSLFFSRSEDPENLLEMLTLIDRF
GGHFDEVYTRAIRDANDSSALRKQADAAHIDFEKLADESQRAYDAAQHARQAAASAVDEQKARSKVLLAQLAVLQNTTQE
VQKRYLAGVRERRERAEAARRRAALRDKGNYAAATALLSNNPPRSSAVAKVLNFARRAINLPYVFGGTGNPGYDCSGLTL
MAYRAAGINIGSHSVNSQYYTARAKGQLVSYENRQPGDLLFWGSGPGSFYHNGIYVGNGMMIAAPDFGDVVKLQPVWGIP
WLQVARPAQ

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Secreted, cell wall [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C40 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 45211; Mature: 45079

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRCVRRCFIVALVSVLCSSMLFQTSVAADPTGEPVPPGYPNWNDVERARRNQDAKRREV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
ENITGLVMALQDRVNQAVRAAAISAERYQEAKIKLEDASRRSKSFAELAKNSSLKADLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHH
KEAGRMIANLYKRGSSNMSLFFSRSEDPENLLEMLTLIDRFGGHFDEVYTRAIRDANDSS
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
ALRKQADAAHIDFEKLADESQRAYDAAQHARQAAASAVDEQKARSKVLLAQLAVLQNTTQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVQKRYLAGVRERRERAEAARRRAALRDKGNYAAATALLSNNPPRSSAVAKVLNFARRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
NLPYVFGGTGNPGYDCSGLTLMAYRAAGINIGSHSVNSQYYTARAKGQLVSYENRQPGDL
CCCEEECCCCCCCCCCCCHHEEEEHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCE
LFWGSGPGSFYHNGIYVGNGMMIAAPDFGDVVKLQPVWGIPWLQVARPAQ
EEECCCCCCCCCCCEEECCCEEEECCCCCCEEEECCCCCCCHHHHCCCCC
>Mature Secondary Structure 
GRCVRRCFIVALVSVLCSSMLFQTSVAADPTGEPVPPGYPNWNDVERARRNQDAKRREV
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHH
ENITGLVMALQDRVNQAVRAAAISAERYQEAKIKLEDASRRSKSFAELAKNSSLKADLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHCCCCHHHHHH
KEAGRMIANLYKRGSSNMSLFFSRSEDPENLLEMLTLIDRFGGHFDEVYTRAIRDANDSS
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHH
ALRKQADAAHIDFEKLADESQRAYDAAQHARQAAASAVDEQKARSKVLLAQLAVLQNTTQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVQKRYLAGVRERRERAEAARRRAALRDKGNYAAATALLSNNPPRSSAVAKVLNFARRAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHC
NLPYVFGGTGNPGYDCSGLTLMAYRAAGINIGSHSVNSQYYTARAKGQLVSYENRQPGDL
CCCEEECCCCCCCCCCCCHHEEEEHHHCCCCCCCCCCCCEEEEECCCCEEECCCCCCCCE
LFWGSGPGSFYHNGIYVGNGMMIAAPDFGDVVKLQPVWGIPWLQVARPAQ
EEECCCCCCCCCCCEEECCCEEEECCCCCCEEEECCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2780297 [H]