| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is 28572769
Identifier: 28572769
GI number: 28572769
Start: 709006
End: 709233
Strand: Reverse
Name: 28572769
Synonym: TW623
Alternate gene names: NA
Gene position: 709233-709006 (Counterclockwise)
Preceding gene: 28572770
Following gene: 28572768
Centisome position: 76.6
GC content: 46.93
Gene sequence:
>228_bases TTGGGCGACATAGTTGGCAACCTATTCAATGCCGCAGGCAATGGTCTAGGCGGTATCGTAGGCGGACTCCTGGGTAGATC ACCATCTCTATCTGCCACAGAGTTACATGTAACACATAGGCATTGGCACAACCATAACCATATACACAACAACACCTGTC AGCTTATCTGTAACAGGTTTTATAACCGGTTACACAATAAGCCCAACCACCCCAACCACAGACAGTAA
Upstream 100 bases:
>100_bases AAACTCAACCACCCTAACCTGCTGCAGCAAAACCTGCTCCTGCTAAACTTGCGCAACCCGCTGCTACTGAGCTGCCCCCA CACAATCATCCGGAGGCCTC
Downstream 100 bases:
>100_bases CACCGTAACCATCAATATTGATACCAGTAACCCTTGATTCCTCTGGAACCATAACAGGAAGTATAGATACGAGTGTTACA CCTGGAAAATATGTTGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MGDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRFYNRLHNKPNHPNHRQ
Sequences:
>Translated_75_residues MGDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRFYNRLHNKPNHPNHRQ >Mature_74_residues GDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRFYNRLHNKPNHPNHRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8388; Mature: 8256
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRF CCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCHHHHHHHHHH YNRLHNKPNHPNHRQ HHHHCCCCCCCCCCC >Mature Secondary Structure GDIVGNLFNAAGNGLGGIVGGLLGRSPSLSATELHVTHRHWHNHNHIHNNTCQLICNRF CCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHCCCCCCCCCHHHHHHHHHH YNRLHNKPNHPNHRQ HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA