| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is prsA [H]
Identifier: 28572733
GI number: 28572733
Start: 657383
End: 658429
Strand: Direct
Name: prsA [H]
Synonym: TW585
Alternate gene names: 28572733
Gene position: 657383-658429 (Clockwise)
Preceding gene: 28572732
Following gene: 28572734
Centisome position: 71.0
GC content: 46.42
Gene sequence:
>1047_bases TTGACTGACTTGCTAAGTTGCGCACCGCATGCCCGGGGTGCAAATAATCGACCCGGTTTCTCGGACCGTGATGTGCAAAA TGACGGGCCAATGCGCAACCTAGTGCTCATTGCAGGTCGCTCTCATCCGGACTTAGCCCGGGCAACCGCAGAAAGTCTCG GTGTTGGACTTTTGCAAACGGATATCAGAACTTTTGCAAACGGTGAGATATACACACGATTCAATTCAAGTGTTCGTGGT AAAGATGTGTTTGTTCTCCAGACCGGATGTGATCCCGTTAATGACGGACTTGTTGAGCTTCTGCTCTTGATTGACTCATG TAAGCGTGCTTCTGCAAAGCACATTTCTGCTGTAACCCCATGCTATCCCTACTCACGTCAAGACAGAAAGGGATATGGTC GTGAGCCGATTTCTGCCAGATTGGTTGCTGACTTGATTGCATGCGCAGGGGCCGACAGGATAATTACGGTTGACTTGCAT GCTTCCCAGATACAGGGATTTTTCAATGGACCAGTTGATCACTTAACAGGCGTTCCTGCTCTTATAAAACATGTAAAATC ACTTAGGATTGATAACCTGACAATTGTCTCACCTGATATTGGTCGGGTGAAGGTTGCGGATGTTTGGTCAGATAAACTAA ATGCTCCGCTCGCAATTATTCATAAACGACGTGACCCGCGTGTTCACAATAATGTCACGATGCACGAAATTGTTGGTGAT GTGCGCAGCAGAGTGTGTTTGGTGGTTGATGACCTGATTGATACCGGAGACACACTGGCAAAAGCAGCTATCGCATTAAA AAAAGCCGGAGCCGTAAAAGTAATAGCAGCTGCAACCCATGGGATTTTTAGCACCCCAGAGCGTCTTGTTTCTTGTGGTG AAATTGACCATGTTATTGTGACTGACTCTGTTCCCGCAAGTAAGGTATTTGATCGCGTTAAAACTGTTTCAATCGCCCCA CTTTTAGCATGTGCAATCTGTGAGGTTGTAACGGAAGGTTCAATTAGTGAGATGCTTGACTGTGTCTCGAAGCGCATTGA TAACTAA
Upstream 100 bases:
>100_bases CGGGTAGTGTTATTAGAGATGATATCGAAGAAGGTGCGCTATCCCTTACAGAGCTAAAGCAAAAAACTATTCCAAAATGG GCCGAGAATAGAGGAGACGG
Downstream 100 bases:
>100_bases CCTGGCGCCGGTAAAAGCGGATGTGATAAGGGCACATGTGGGCAAGTGCCTGTTAGCTAGTATTAGTGATCTAACTAGTA TTAGTGATCGCTTAAATATC
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTDLLSCAPHARGANNRPGFSDRDVQNDGPMRNLVLIAGRSHPDLARATAESLGVGLLQTDIRTFANGEIYTRFNSSVRG KDVFVLQTGCDPVNDGLVELLLLIDSCKRASAKHISAVTPCYPYSRQDRKGYGREPISARLVADLIACAGADRIITVDLH ASQIQGFFNGPVDHLTGVPALIKHVKSLRIDNLTIVSPDIGRVKVADVWSDKLNAPLAIIHKRRDPRVHNNVTMHEIVGD VRSRVCLVVDDLIDTGDTLAKAAIALKKAGAVKVIAAATHGIFSTPERLVSCGEIDHVIVTDSVPASKVFDRVKTVSIAP LLACAICEVVTEGSISEMLDCVSKRIDN
Sequences:
>Translated_348_residues MTDLLSCAPHARGANNRPGFSDRDVQNDGPMRNLVLIAGRSHPDLARATAESLGVGLLQTDIRTFANGEIYTRFNSSVRG KDVFVLQTGCDPVNDGLVELLLLIDSCKRASAKHISAVTPCYPYSRQDRKGYGREPISARLVADLIACAGADRIITVDLH ASQIQGFFNGPVDHLTGVPALIKHVKSLRIDNLTIVSPDIGRVKVADVWSDKLNAPLAIIHKRRDPRVHNNVTMHEIVGD VRSRVCLVVDDLIDTGDTLAKAAIALKKAGAVKVIAAATHGIFSTPERLVSCGEIDHVIVTDSVPASKVFDRVKTVSIAP LLACAICEVVTEGSISEMLDCVSKRIDN >Mature_347_residues TDLLSCAPHARGANNRPGFSDRDVQNDGPMRNLVLIAGRSHPDLARATAESLGVGLLQTDIRTFANGEIYTRFNSSVRGK DVFVLQTGCDPVNDGLVELLLLIDSCKRASAKHISAVTPCYPYSRQDRKGYGREPISARLVADLIACAGADRIITVDLHA SQIQGFFNGPVDHLTGVPALIKHVKSLRIDNLTIVSPDIGRVKVADVWSDKLNAPLAIIHKRRDPRVHNNVTMHEIVGDV RSRVCLVVDDLIDTGDTLAKAAIALKKAGAVKVIAAATHGIFSTPERLVSCGEIDHVIVTDSVPASKVFDRVKTVSIAPL LACAICEVVTEGSISEMLDCVSKRIDN
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=318, Percent_Identity=43.0817610062893, Blast_Score=250, Evalue=1e-66, Organism=Homo sapiens, GI84875539, Length=321, Percent_Identity=42.9906542056075, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI4506127, Length=315, Percent_Identity=43.1746031746032, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI28557709, Length=302, Percent_Identity=43.3774834437086, Blast_Score=241, Evalue=8e-64, Organism=Homo sapiens, GI194018537, Length=317, Percent_Identity=35.0157728706625, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI4506133, Length=345, Percent_Identity=33.6231884057971, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI310128524, Length=152, Percent_Identity=32.8947368421053, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI310115209, Length=152, Percent_Identity=32.8947368421053, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI310118259, Length=152, Percent_Identity=32.8947368421053, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI310119946, Length=152, Percent_Identity=32.8947368421053, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI1787458, Length=316, Percent_Identity=44.9367088607595, Blast_Score=248, Evalue=3e-67, Organism=Caenorhabditis elegans, GI17554702, Length=324, Percent_Identity=40.4320987654321, Blast_Score=230, Evalue=7e-61, Organism=Caenorhabditis elegans, GI25149168, Length=303, Percent_Identity=41.9141914191419, Blast_Score=230, Evalue=8e-61, Organism=Caenorhabditis elegans, GI71989924, Length=324, Percent_Identity=40.4320987654321, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17554704, Length=298, Percent_Identity=41.9463087248322, Blast_Score=227, Evalue=8e-60, Organism=Caenorhabditis elegans, GI17570245, Length=337, Percent_Identity=33.8278931750742, Blast_Score=182, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6319403, Length=327, Percent_Identity=39.7553516819572, Blast_Score=234, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320946, Length=309, Percent_Identity=42.0711974110032, Blast_Score=232, Evalue=7e-62, Organism=Saccharomyces cerevisiae, GI6321776, Length=316, Percent_Identity=38.6075949367089, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6322667, Length=196, Percent_Identity=39.2857142857143, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6324511, Length=97, Percent_Identity=43.298969072165, Blast_Score=90, Evalue=6e-19, Organism=Drosophila melanogaster, GI21355239, Length=278, Percent_Identity=45.6834532374101, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI45551540, Length=301, Percent_Identity=42.5249169435216, Blast_Score=228, Evalue=6e-60, Organism=Drosophila melanogaster, GI281362873, Length=374, Percent_Identity=31.8181818181818, Blast_Score=174, Evalue=8e-44, Organism=Drosophila melanogaster, GI24651454, Length=374, Percent_Identity=31.8181818181818, Blast_Score=174, Evalue=8e-44, Organism=Drosophila melanogaster, GI24651458, Length=358, Percent_Identity=32.4022346368715, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24651456, Length=358, Percent_Identity=32.4022346368715, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI45552010, Length=395, Percent_Identity=28.8607594936709, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI24651462, Length=379, Percent_Identity=29.287598944591, Blast_Score=144, Evalue=8e-35, Organism=Drosophila melanogaster, GI24651464, Length=379, Percent_Identity=29.287598944591, Blast_Score=144, Evalue=8e-35,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 37475; Mature: 37343
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLLSCAPHARGANNRPGFSDRDVQNDGPMRNLVLIAGRSHPDLARATAESLGVGLLQT CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHH DIRTFANGEIYTRFNSSVRGKDVFVLQTGCDPVNDGLVELLLLIDSCKRASAKHISAVTP HHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC CYPYSRQDRKGYGREPISARLVADLIACAGADRIITVDLHASQIQGFFNGPVDHLTGVPA CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCHHHHCCHHH LIKHVKSLRIDNLTIVSPDIGRVKVADVWSDKLNAPLAIIHKRRDPRVHNNVTMHEIVGD HHHHHHHHCCCCEEEECCCCCCEEEEEHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH VRSRVCLVVDDLIDTGDTLAKAAIALKKAGAVKVIAAATHGIFSTPERLVSCGEIDHVIV HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHCCCCCCHHHHHHCCCCCEEEE TDSVPASKVFDRVKTVSIAPLLACAICEVVTEGSISEMLDCVSKRIDN ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure TDLLSCAPHARGANNRPGFSDRDVQNDGPMRNLVLIAGRSHPDLARATAESLGVGLLQT CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHH DIRTFANGEIYTRFNSSVRGKDVFVLQTGCDPVNDGLVELLLLIDSCKRASAKHISAVTP HHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC CYPYSRQDRKGYGREPISARLVADLIACAGADRIITVDLHASQIQGFFNGPVDHLTGVPA CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHCCCHHHHCCHHH LIKHVKSLRIDNLTIVSPDIGRVKVADVWSDKLNAPLAIIHKRRDPRVHNNVTMHEIVGD HHHHHHHHCCCCEEEECCCCCCEEEEEHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHH VRSRVCLVVDDLIDTGDTLAKAAIALKKAGAVKVIAAATHGIFSTPERLVSCGEIDHVIV HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHCCCCCCHHHHHHCCCCCEEEE TDSVPASKVFDRVKTVSIAPLLACAICEVVTEGSISEMLDCVSKRIDN ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572948; 12692562 [H]