Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is ftsQ [H]

Identifier: 28572688

GI number: 28572688

Start: 574920

End: 575669

Strand: Reverse

Name: ftsQ [H]

Synonym: TW540

Alternate gene names: 28572688

Gene position: 575669-574920 (Counterclockwise)

Preceding gene: 28572689

Following gene: 28572686

Centisome position: 62.17

GC content: 45.07

Gene sequence:

>750_bases
ATGACAGTTGTAGATAATGCCTATCAGAACTTTCTTTATTGCCGCAAGCAGCGCAAAGATTACGAGAGGGTCTGTAAGAT
ACGCACAAAGATTATAAGGAGGTTTATCCTGCTTGCATGCGCTGTCTTTCTACTGTTTTGTATGCTTTCGGCTTATTCAC
CAGTTATGTCTCTGCGCAGTATCCGAGTGGCTGGCAATATGCAAGTCAAGACCGATGATATAGTGGCCGCTCTTCGCGGG
GAGTTTAACAAACCACTTGCCTTTGTTGATCCGGAAACTGTTAGAAAAAAGCTGGCTAAATTTAAGTTACTAAAGGAGGT
TACAGTGGAAGCCAAACCCCCAGGGGCGATACTTGTTAGAGTCTCCGAACGTGTGCCGCTCGCCTTTTTAGAGAGACCGG
ACGGCTTTCATGTGCTGGATGAAGACGGCGTTTCGCTGAAGGTAACCCAAAGTCCCCCATTGGGAATGGTAAGAATTGAT
GTGAAAGATGGTAATCAAGAGCAGCTTGTTGCTTCCCTTGGGTGGGTAATTGCAAATATTCCAGATGCCCTTAAAAAACG
TGTAGACCTCATTTCTGCCGAGACCCCATCGGGAATAAATCTCAAACTTGATAACAGTACTAAAACCGTGTTTTGGGGTA
GTTTTCAAAACAGCAAACTAAAAGCAAAAGTGCTTGAAAAGCTGTTATCCATTCCCGGGCATTACAGTAGTTTTAATGTC
TCCGCACCAGAAGCCCCAGCAGTGAGCTAG

Upstream 100 bases:

>100_bases
TTATCACACTTGGTTGTGGAGATGTTTATAAGATAATTCCAAGTATTGTCGAACAGCTTAGATCCGCAAGATGAGTGCGA
ATTCGGTGACGGTTTAGATA

Downstream 100 bases:

>100_bases
GCCGATAGTTTTTAGCATATGTGTTCTTATTTGTGTGTGTAATGGGGGATGCTTAGTGTCAAGGCTCACACTCCAAATCC
AGCACGCGTTATCATCAGCC

Product: cell division protein FtsQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRSIRVAGNMQVKTDDIVAALRG
EFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVRVSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRID
VKDGNQEQLVASLGWVIANIPDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV
SAPEAPAVS

Sequences:

>Translated_249_residues
MTVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRSIRVAGNMQVKTDDIVAALRG
EFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVRVSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRID
VKDGNQEQLVASLGWVIANIPDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV
SAPEAPAVS
>Mature_248_residues
TVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRSIRVAGNMQVKTDDIVAALRGE
FNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVRVSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRIDV
KDGNQEQLVASLGWVIANIPDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNVS
APEAPAVS

Specific function: This protein may be involved in septum formation [H]

COG id: COG1589

COG function: function code M; Cell division septal protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ftsQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005548
- InterPro:   IPR013685 [H]

Pfam domain/function: PF03799 FtsQ; PF08478 POTRA_1 [H]

EC number: NA

Molecular weight: Translated: 27764; Mature: 27633

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRVAGNMQVKTDDIVAALRGEFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVR
EEEECCEEECHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
VSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRIDVKDGNQEQLVASLGWVIANI
ECCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
PDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV
HHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC
SAPEAPAVS
CCCCCCCCC
>Mature Secondary Structure 
TVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRVAGNMQVKTDDIVAALRGEFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVR
EEEECCEEECHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
VSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRIDVKDGNQEQLVASLGWVIANI
ECCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
PDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV
HHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC
SAPEAPAVS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]