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The map label for this gene is yadR [C]

Identifier: 28572677

GI number: 28572677

Start: 567559

End: 567903

Strand: Reverse

Name: yadR [C]

Synonym: TW528

Alternate gene names: 28572677

Gene position: 567903-567559 (Counterclockwise)

Preceding gene: 28572678

Following gene: 28572676

Centisome position: 61.33

GC content: 48.12

Gene sequence:

>345_bases
TTGACTGACACCCCCCCCTCCCATGGAGTGCATTTGACAGATGTCGCTGTGAACAAGGTCAAGCAGTTTCTAGAGCAGGA
ACAGCGCGACGACCTGCGACTCAGAATAGCTGTTCAGCCCGGGGGGTGCTCTGGCCTCAGATATCAGCTGTATTTTGATG
AGAGACTCTTAGAGGGTGATTGCGTAAAAGATTTTGATGGAGTTGCATTGGTTGTTGATGACATGAGCGTTCCGTATCTC
GATGGTGCAACGATTGATTTTCACGACACAATTAGCAAGCAGGGTTTTACAATCGATAACCCTAATGCCAAGGGTATGTG
TGCCTGTGGTGACAGTTTTAACTAG

Upstream 100 bases:

>100_bases
CCGAATGAGTCATTGAGCCTTAAAGTGTTCAGAAATGCTATAGCAGCGCAGGTGTATTTTTTGCTGTCACTTGGCGGTGA
GTGATTTGACCAACGGTTCA

Downstream 100 bases:

>100_bases
AGTGTGAGTTTCTGCACAATTCGGTTTCCTGTCGCCTTCCAAGGTGAGTGATATAGAATTACCCATGTTTTGAGAAAGTT
TCTGACGGACCTGCCTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTDTPPSHGVHLTDVAVNKVKQFLEQEQRDDLRLRIAVQPGGCSGLRYQLYFDERLLEGDCVKDFDGVALVVDDMSVPYL
DGATIDFHDTISKQGFTIDNPNAKGMCACGDSFN

Sequences:

>Translated_114_residues
MTDTPPSHGVHLTDVAVNKVKQFLEQEQRDDLRLRIAVQPGGCSGLRYQLYFDERLLEGDCVKDFDGVALVVDDMSVPYL
DGATIDFHDTISKQGFTIDNPNAKGMCACGDSFN
>Mature_113_residues
TDTPPSHGVHLTDVAVNKVKQFLEQEQRDDLRLRIAVQPGGCSGLRYQLYFDERLLEGDCVKDFDGVALVVDDMSVPYLD
GATIDFHDTISKQGFTIDNPNAKGMCACGDSFN

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=110, Percent_Identity=32.7272727272727, Blast_Score=67, Evalue=4e-12,
Organism=Homo sapiens, GI160420328, Length=117, Percent_Identity=31.6239316239316, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786351, Length=105, Percent_Identity=42.8571428571429, Blast_Score=99, Evalue=7e-23,
Organism=Escherichia coli, GI1788877, Length=105, Percent_Identity=38.0952380952381, Blast_Score=72, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71998452, Length=107, Percent_Identity=34.5794392523364, Blast_Score=72, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6323001, Length=104, Percent_Identity=31.7307692307692, Blast_Score=62, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24649697, Length=114, Percent_Identity=31.5789473684211, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24642263, Length=112, Percent_Identity=34.8214285714286, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12598; Mature: 12467

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTPPSHGVHLTDVAVNKVKQFLEQEQRDDLRLRIAVQPGGCSGLRYQLYFDERLLEGD
CCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCEECCCC
CVKDFDGVALVVDDMSVPYLDGATIDFHDTISKQGFTIDNPNAKGMCACGDSFN
CCCCCCCEEEEEECCCCCCCCCCEEEHHCCCCCCCCEEECCCCCEEEECCCCCC
>Mature Secondary Structure 
TDTPPSHGVHLTDVAVNKVKQFLEQEQRDDLRLRIAVQPGGCSGLRYQLYFDERLLEGD
CCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEECCEECCCC
CVKDFDGVALVVDDMSVPYLDGATIDFHDTISKQGFTIDNPNAKGMCACGDSFN
CCCCCCCEEEEEECCCCCCCCCCEEEHHCCCCCCCCEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203 [H]