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The map label for this gene is ctaC [H]

Identifier: 28572676

GI number: 28572676

Start: 566617

End: 567489

Strand: Reverse

Name: ctaC [H]

Synonym: TW527

Alternate gene names: 28572676

Gene position: 567489-566617 (Counterclockwise)

Preceding gene: 28572677

Following gene: 28572675

Centisome position: 61.29

GC content: 44.56

Gene sequence:

>873_bases
TTGAGAAAGTTTCTGACGGACCTGCCTGTTATAAGGCCCATCAGATCTCTCCTTGTCGTATTTGTCCTAACCTTATCGCT
TGTTTTTGTTGGCTGTACAACACAGCAAATGCACGGCTTCCTGCCTGGCTTTGTTGAGGGTGAGTCGTCTGTGACTGAAA
CAACACAGGTATATTCAGATCTCTGGTTTAATGCCTGGTTCGTTTTGATAGTGATCGGCATTTTGGTGTGGGCAATGGTT
GTTGTGGCAGTTGTCGTGTTTAGGCGTAAGAGAAGTGACACCACCCTTCCGCCCCAGGTGCAGTACAATCTGCCGGTAGA
AACCCTTCTTACAGGCCTTCCACTTATTCTCGTTGCTGTCTTTTTTGTTTTTAGTATAAGGGTTTCTGATGCTGTCAATT
TGCCTAAACCGGCCGATGTGCATATTGGGGTAATTGGAAAGCAGTGGGCGTGGGATTTTGTGTATTTTGACAGTAATACT
TATTTTCCGGGCCTCCAAGCGCAGTATATTGAAAGCTCCCCAGGGAAGGTTGATGAGTCAAAATTACCGGTTTTGTACTT
GCCAGTGAATAAAAAAGTTGAGATTGATCTCAGAAGTCGTGATGTCGTCCACTCATTCTGGATTATCGATTTTCTTTATA
AGCGGGATATTGTTCCGGGCCTTACGAATCGCATCTATTTTACCCCGACGCGTATTGGTGAATATCGTGGCAAATGCGCT
GAGTTTTGTGGTGAGTTTCATTCTGCGATGCTTTTTGTTGTGAAGGTTGTGACGCAAGAAGAGTATAAAAAGCATATGGC
AGATCTTGCAGGTATGGGATACATTGGTACCGTTGGGTGGGAGAGTCTTGATCCTGCCAGTAAAAAACATTAG

Upstream 100 bases:

>100_bases
TATGTGTGCCTGTGGTGACAGTTTTAACTAGAGTGTGAGTTTCTGCACAATTCGGTTTCCTGTCGCCTTCCAAGGTGAGT
GATATAGAATTACCCATGTT

Downstream 100 bases:

>100_bases
TTTGGGCGTGTATGAATACTAGTGTCGCGGCGACGTTATCCGAGAGAAACAGAAAGGGTAGCGCCCTGCTGTCTATTCTT
ACGACCACAAATCATAAGAC

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Cytochrome aa3 subunit 2; Cytochrome c oxidase polypeptide II [H]

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MRKFLTDLPVIRPIRSLLVVFVLTLSLVFVGCTTQQMHGFLPGFVEGESSVTETTQVYSDLWFNAWFVLIVIGILVWAMV
VVAVVVFRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAVFFVFSIRVSDAVNLPKPADVHIGVIGKQWAWDFVYFDSNT
YFPGLQAQYIESSPGKVDESKLPVLYLPVNKKVEIDLRSRDVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCA
EFCGEFHSAMLFVVKVVTQEEYKKHMADLAGMGYIGTVGWESLDPASKKH

Sequences:

>Translated_290_residues
MRKFLTDLPVIRPIRSLLVVFVLTLSLVFVGCTTQQMHGFLPGFVEGESSVTETTQVYSDLWFNAWFVLIVIGILVWAMV
VVAVVVFRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAVFFVFSIRVSDAVNLPKPADVHIGVIGKQWAWDFVYFDSNT
YFPGLQAQYIESSPGKVDESKLPVLYLPVNKKVEIDLRSRDVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCA
EFCGEFHSAMLFVVKVVTQEEYKKHMADLAGMGYIGTVGWESLDPASKKH
>Mature_290_residues
MRKFLTDLPVIRPIRSLLVVFVLTLSLVFVGCTTQQMHGFLPGFVEGESSVTETTQVYSDLWFNAWFVLIVIGILVWAMV
VVAVVVFRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAVFFVFSIRVSDAVNLPKPADVHIGVIGKQWAWDFVYFDSNT
YFPGLQAQYIESSPGKVDESKLPVLYLPVNKKVEIDLRSRDVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCA
EFCGEFHSAMLFVVKVVTQEEYKKHMADLAGMGYIGTVGWESLDPASKKH

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Homo sapiens, GI251831110, Length=160, Percent_Identity=32.5, Blast_Score=78, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR014222
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 32935; Mature: 32935

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLTDLPVIRPIRSLLVVFVLTLSLVFVGCTTQQMHGFLPGFVEGESSVTETTQVYSD
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH
LWFNAWFVLIVIGILVWAMVVVAVVVFRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
FFVFSIRVSDAVNLPKPADVHIGVIGKQWAWDFVYFDSNTYFPGLQAQYIESSPGKVDES
HHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCC
KLPVLYLPVNKKVEIDLRSRDVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCA
CCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH
EFCGEFHSAMLFVVKVVTQEEYKKHMADLAGMGYIGTVGWESLDPASKKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRKFLTDLPVIRPIRSLLVVFVLTLSLVFVGCTTQQMHGFLPGFVEGESSVTETTQVYSD
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH
LWFNAWFVLIVIGILVWAMVVVAVVVFRRKRSDTTLPPQVQYNLPVETLLTGLPLILVAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH
FFVFSIRVSDAVNLPKPADVHIGVIGKQWAWDFVYFDSNTYFPGLQAQYIESSPGKVDES
HHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCC
KLPVLYLPVNKKVEIDLRSRDVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCA
CCCEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHH
EFCGEFHSAMLFVVKVVTQEEYKKHMADLAGMGYIGTVGWESLDPASKKH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11572948; 12692562 [H]