Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

Click here to switch to the map view.

The map label for this gene is secG [H]

Identifier: 28572618

GI number: 28572618

Start: 503234

End: 503530

Strand: Reverse

Name: secG [H]

Synonym: TW469

Alternate gene names: 28572618

Gene position: 503530-503234 (Counterclockwise)

Preceding gene: 28572619

Following gene: 28572617

Centisome position: 54.38

GC content: 45.79

Gene sequence:

>297_bases
ATGTGTTTGTGCTTTCTCGGCTTTGTGCCTGTTTTTTTGACTGAGGATGTTTTGATCGTTCTAAAGCTTGTGCTACTTGG
GATTGTTGTTTTGACGAGTTTTGCCCTTGTTTTGCTTATACTGTTGCATAAGGGAAGGGGTGGCGGACTGTCAGATATGT
TCGGGGGCGGTATTACCGTTTCCTTTGCATCAAGCGGTGTGGCCGAGCGTAACTTGAATCGCCTTACTGTTATGCTTGCC
CTTCTTTGGGGTGTTACAATTATCACTCTCTCGGTTCTAGCAAGGTTTCGCCTTTAG

Upstream 100 bases:

>100_bases
CATTCTTGTTGGCAGAGCTTCCTTGAATGCATCTGATTTCGCATCCCTGATAAAGACGTGCTGTTTGTAAATCTGGTGTA
TACTCGGGTTTGCGAACTGC

Downstream 100 bases:

>100_bases
GGCATTGCGTGTTTGGAGTATTGCTTTAGTATGCGTTGCTCGCTTGTTTGTATTCTATAAGTCTGGTGGTTATGAAGCAG
CCTTCTGTCTCTGATAAGAA

Product: preprotein translocase subunit SecG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITVSFASSGVAERNLNRLTVMLA
LLWGVTIITLSVLARFRL

Sequences:

>Translated_98_residues
MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITVSFASSGVAERNLNRLTVMLA
LLWGVTIITLSVLARFRL
>Mature_98_residues
MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITVSFASSGVAERNLNRLTVMLA
LLWGVTIITLSVLARFRL

Specific function: Involved in protein export. Participates in an early event of protein translocation [H]

COG id: COG1314

COG function: function code U; Preprotein translocase subunit SecG

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004692 [H]

Pfam domain/function: PF03840 SecG [H]

EC number: NA

Molecular weight: Translated: 10505; Mature: 10505

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEE
SFASSGVAERNLNRLTVMLALLWGVTIITLSVLARFRL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEE
SFASSGVAERNLNRLTVMLALLWGVTIITLSVLARFRL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]