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The map label for this gene is rpmE2

Identifier: 28572608

GI number: 28572608

Start: 495667

End: 495918

Strand: Reverse

Name: rpmE2

Synonym: TW458

Alternate gene names: 28572608

Gene position: 495918-495667 (Counterclockwise)

Preceding gene: 28572609

Following gene: 28572607

Centisome position: 53.56

GC content: 42.86

Gene sequence:

>252_bases
GTGAAGTCTGATATCCACCCTGAATACGGGTATGTTGTTTTTAAGGACCTCGCAAGCAGTGAGATGTTTTTGACGCGTTC
TGTTTTGAAACCTGAAAAGCAAATTGAATGGAATGATGGTAATCATTATCCTCTTTTTGAAGTCGAGATATCATCGGCTT
CCCACCCCTTCTATACTGGGCAGCAGCGTATCCTAGACTCTGAAGGGCGTGTTGAGAAATTCTACGCACGGTACAAAAAG
CAATCACAATAG

Upstream 100 bases:

>100_bases
TCACATGCAGTTCAAGCAGTTTTTATTTCTCGCTTCAGAATATTCTGTGTTTAGACTAGGATTAAGGTGATGTTGAGCGC
CTTTGTTGTTTGGAGTGTAG

Downstream 100 bases:

>100_bases
TTTGTGGATGTTCTGTTATGTCAGCATCTGGTAGTCTATATCCTCGAGCGCGGGTGGCGGAATCGGTAGACGCGCTAGCT
TGAGGTGCTAGTGCCAATTT

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MKSDIHPEYGYVVFKDLASSEMFLTRSVLKPEKQIEWNDGNHYPLFEVEISSASHPFYTGQQRILDSEGRVEKFYARYKK
QSQ

Sequences:

>Translated_83_residues
MKSDIHPEYGYVVFKDLASSEMFLTRSVLKPEKQIEWNDGNHYPLFEVEISSASHPFYTGQQRILDSEGRVEKFYARYKK
QSQ
>Mature_83_residues
MKSDIHPEYGYVVFKDLASSEMFLTRSVLKPEKQIEWNDGNHYPLFEVEISSASHPFYTGQQRILDSEGRVEKFYARYKK
QSQ

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=80, Percent_Identity=46.25, Blast_Score=76, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_TROW8 (Q83HQ6)

Other databases:

- EMBL:   BX251411
- RefSeq:   NP_789388.1
- ProteinModelPortal:   Q83HQ6
- SMR:   Q83HQ6
- STRING:   Q83HQ6
- GeneID:   1064299
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW458
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- PhylomeDB:   Q83HQ6
- ProtClustDB:   PRK01678
- BioCyc:   TWHI218496:TW0433-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9807; Mature: 9807

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDIHPEYGYVVFKDLASSEMFLTRSVLKPEKQIEWNDGNHYPLFEVEISSASHPFYTG
CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCEECC
QQRILDSEGRVEKFYARYKKQSQ
CHHEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKSDIHPEYGYVVFKDLASSEMFLTRSVLKPEKQIEWNDGNHYPLFEVEISSASHPFYTG
CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCEECCCCCCCCEEEEEECCCCCCEECC
QQRILDSEGRVEKFYARYKKQSQ
CHHEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12606174