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The map label for this gene is sufB [C]

Identifier: 28572586

GI number: 28572586

Start: 475078

End: 476226

Strand: Direct

Name: sufB [C]

Synonym: TW435

Alternate gene names: 28572586

Gene position: 475078-476226 (Clockwise)

Preceding gene: 28572585

Following gene: 28572587

Centisome position: 51.31

GC content: 43.86

Gene sequence:

>1149_bases
TTGGCTAGTCAATCGCCAACACAAACTCGGTCCGAGAGATTCTGTTCTGAAAATCCTAGTGATTTTCCGGAACCGAGCAA
TAGAGATCTGGCCTGGAAATATGCCCCAATCCCCATTGTAGAAAACTTCCTTAGCAAGGATTTTTACCCCTATGAATACC
ATATATCTCTCGCGGGCTCAGATGCGGGTAATGTAAAGCCAGCCATTGATAGGCCGATTTTTAGGTGGTCTACAAAAGAA
AATGTTGCCCTAGGGCGCGCTGGTTTGCCCGAGGATAGAACCTCTGCTTTTGCGTGGCAAAGGACACAGCGTGTATTGCT
CGTTGACCTGGAAGGCGCAGAGTCTATTATCCTCGATCGAAGATTTGAGCGCTGCACGGTTGCACATACCATTATTCATG
TAAAAGCTCACGCAGATGCAAAGTTATTCATAAATAACCACGGTTACGATGGGCTTATAGAAAACCTGGAAATAATTCTT
GAAGATAATGCAATTCTTCAGCTTATTAGCTGTCAGGATTGGGATGAAGCATCTGTACATCTTGCGTATCATTTTGTGTA
TTTTGGAAAAAATAGCCGCCTGAAGCACTGTTCAGCCACGACTGGTGGTCGGTTTGTGCGCCTTAATCCAGCGTTTCAAT
TGGCAGAAGAAGGTTCCGAAGTTGAATCACTTGGTATTTATTTTGCCCAGAATAAGCAACATTTTGAACATCAAGTATAC
GTGCATCATGCAGCACAGGATACAAAGAGTGAGATTAATTACCGTGGTGTTCTATCTGGTAATGGTGCACGCACAGCCTG
GGTTGGCGATGTGCTCATTGATACATTAGCGAGAAACTCTGATTCGTATGAGCAAAATAGAAATCTCATGATAGGCAGCG
GCACCAGAGCTGATTCTGTTCCTAATTTGGAAATAAAAAATGGAAACATCCTGGGTGCCGGGCATGCCAGTGCAACTATG
CGCTTTGACGATGAGCATCTCTTTTATCTACAATCAAGAGGTATAGACAAGAATCAAGCTTTACGTATGGTTGTCTCTGG
CTTCGTACATGGCATGTTACAGAAGTCTGATATCGGGTGTGGTGGGGATGTCCTTCTGCGCTTATTTTCTAAAAAGCTTG
ATGCTCTTGTATCTTGTATTGGGGATTGA

Upstream 100 bases:

>100_bases
ATGATAGTTCGGGGTTTTATTGATCCTATAGTGCGAGAGCTACCCATGGAATATGCAATGGAGCTCAATAAATTGATTGA
AATGAGCATGGAAGGTGCAG

Downstream 100 bases:

>100_bases
GCTTCAACTGGAGGGTGCATTCTATTGAAAGTTTGCCCGGTATCTGATTTGACAGAAAATCAACCGGCACGATTTGAAGT
AGATGGTGTTTCTGTGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MASQSPTQTRSERFCSENPSDFPEPSNRDLAWKYAPIPIVENFLSKDFYPYEYHISLAGSDAGNVKPAIDRPIFRWSTKE
NVALGRAGLPEDRTSAFAWQRTQRVLLVDLEGAESIILDRRFERCTVAHTIIHVKAHADAKLFINNHGYDGLIENLEIIL
EDNAILQLISCQDWDEASVHLAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQNKQHFEHQVY
VHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMIGSGTRADSVPNLEIKNGNILGAGHASATM
RFDDEHLFYLQSRGIDKNQALRMVVSGFVHGMLQKSDIGCGGDVLLRLFSKKLDALVSCIGD

Sequences:

>Translated_382_residues
MASQSPTQTRSERFCSENPSDFPEPSNRDLAWKYAPIPIVENFLSKDFYPYEYHISLAGSDAGNVKPAIDRPIFRWSTKE
NVALGRAGLPEDRTSAFAWQRTQRVLLVDLEGAESIILDRRFERCTVAHTIIHVKAHADAKLFINNHGYDGLIENLEIIL
EDNAILQLISCQDWDEASVHLAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQNKQHFEHQVY
VHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMIGSGTRADSVPNLEIKNGNILGAGHASATM
RFDDEHLFYLQSRGIDKNQALRMVVSGFVHGMLQKSDIGCGGDVLLRLFSKKLDALVSCIGD
>Mature_381_residues
ASQSPTQTRSERFCSENPSDFPEPSNRDLAWKYAPIPIVENFLSKDFYPYEYHISLAGSDAGNVKPAIDRPIFRWSTKEN
VALGRAGLPEDRTSAFAWQRTQRVLLVDLEGAESIILDRRFERCTVAHTIIHVKAHADAKLFINNHGYDGLIENLEIILE
DNAILQLISCQDWDEASVHLAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQNKQHFEHQVYV
HHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMIGSGTRADSVPNLEIKNGNILGAGHASATMR
FDDEHLFYLQSRGIDKNQALRMVVSGFVHGMLQKSDIGCGGDVLLRLFSKKLDALVSCIGD

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=207, Percent_Identity=25.1207729468599, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787971, Length=207, Percent_Identity=26.0869565217391, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 42718; Mature: 42587

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASQSPTQTRSERFCSENPSDFPEPSNRDLAWKYAPIPIVENFLSKDFYPYEYHISLAGS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEECC
DAGNVKPAIDRPIFRWSTKENVALGRAGLPEDRTSAFAWQRTQRVLLVDLEGAESIILDR
CCCCCCCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHH
RFERCTVAHTIIHVKAHADAKLFINNHGYDGLIENLEIILEDNAILQLISCQDWDEASVH
HHHHHEEEEEEEEEEECCCEEEEEECCCCCCHHCCEEEEEECCCEEEEEECCCCCCCCEE
LAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQNKQHFEHQVY
EEEEEEEECCCCCEEECCCCCCCEEEEECHHHHHHHCCCCEEEEEEEEECCCCCCCEEEE
VHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMIGSGTRADSV
EEECCCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCC
PNLEIKNGNILGAGHASATMRFDDEHLFYLQSRGIDKNQALRMVVSGFVHGMLQKSDIGC
CCEEECCCCEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GGDVLLRLFSKKLDALVSCIGD
CHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASQSPTQTRSERFCSENPSDFPEPSNRDLAWKYAPIPIVENFLSKDFYPYEYHISLAGS
CCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEEEECC
DAGNVKPAIDRPIFRWSTKENVALGRAGLPEDRTSAFAWQRTQRVLLVDLEGAESIILDR
CCCCCCCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHCCCEEEEEEECCCCHHHHHH
RFERCTVAHTIIHVKAHADAKLFINNHGYDGLIENLEIILEDNAILQLISCQDWDEASVH
HHHHHEEEEEEEEEEECCCEEEEEECCCCCCHHCCEEEEEECCCEEEEEECCCCCCCCEE
LAYHFVYFGKNSRLKHCSATTGGRFVRLNPAFQLAEEGSEVESLGIYFAQNKQHFEHQVY
EEEEEEEECCCCCEEECCCCCCCEEEEECHHHHHHHCCCCEEEEEEEEECCCCCCCEEEE
VHHAAQDTKSEINYRGVLSGNGARTAWVGDVLIDTLARNSDSYEQNRNLMIGSGTRADSV
EEECCCCHHHCCCEEEEEECCCCCEEEHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCC
PNLEIKNGNILGAGHASATMRFDDEHLFYLQSRGIDKNQALRMVVSGFVHGMLQKSDIGC
CCEEECCCCEEECCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
GGDVLLRLFSKKLDALVSCIGD
CHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]