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The map label for this gene is ssb2

Identifier: 28572520

GI number: 28572520

Start: 399273

End: 399719

Strand: Direct

Name: ssb2

Synonym: TW367

Alternate gene names: 28572520

Gene position: 399273-399719 (Clockwise)

Preceding gene: 28572518

Following gene: 28572521

Centisome position: 43.12

GC content: 47.65

Gene sequence:

>447_bases
ATGAGAGGAAAAAGGATGAATCACATTACTGTTTCAGGATTGGTTGCCACTGAGCCGAGAAGTTTTCTCACCGCTGAGGG
TGTCCACATAACTAGTTTTAGATTGGCTGCCCAGGACAGGCATTTTAGCCGAAATGCCAATAGCTGGGTTTCTGGGGATA
CTAACTGGTTTACCGTAACTGGATTTCGCGCACTAGGTTCTAACGCGGCAGAGTCTATTTCGAAGGGTGATCGGGTTATT
GTGTATGGCCGTCTTCGACTGAGAACTTGGGGCGATAACAAAATGGCCGTGGAGATTGAGGCAGAAAGCTTTGGTCATGA
TCTACGGTGGGGGACCAGCGTTTTTTCCAAGCGTTTTTATCAGCTTCCCGAGGCTTCCGACAACTTGCGTACGAAATATG
ATGTTGATGAGGCTGAAACACCTGAGATTCATGCAAAGGCTGCGTAA

Upstream 100 bases:

>100_bases
GTGTTGTCAGTAATTGTGAAACTCATACTAGTTTTCACAATTTTTCTAAACACCAGGTTGGCTCTTTTACCGTGATGTAT
AAAGGCTATGTTTACACCGC

Downstream 100 bases:

>100_bases
TTTCTGAGCTGTTTTGTGTCTTAGTCTTTGTCAAATTTTCTTAACCTGTCTGACTGTTTGCTATGACAACCTTCCTTAGC
TGTATTTTATTTGGAAGTTT

Product: single-strand DNA binding protein

Products: NA

Alternate protein names: SSB 2; Helix-destabilizing protein 2

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRGKRMNHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRNANSWVSGDTNWFTVTGFRALGSNAAESISKGDRVI
VYGRLRLRTWGDNKMAVEIEAESFGHDLRWGTSVFSKRFYQLPEASDNLRTKYDVDEAETPEIHAKAA

Sequences:

>Translated_148_residues
MRGKRMNHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRNANSWVSGDTNWFTVTGFRALGSNAAESISKGDRVI
VYGRLRLRTWGDNKMAVEIEAESFGHDLRWGTSVFSKRFYQLPEASDNLRTKYDVDEAETPEIHAKAA
>Mature_148_residues
MRGKRMNHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRNANSWVSGDTNWFTVTGFRALGSNAAESISKGDRVI
VYGRLRLRTWGDNKMAVEIEAESFGHDLRWGTSVFSKRFYQLPEASDNLRTKYDVDEAETPEIHAKAA

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSB2_TROW8 (P66857)

Other databases:

- EMBL:   BX251411
- RefSeq:   NP_789300.1
- ProteinModelPortal:   P66857
- SMR:   P66857
- STRING:   P66857
- GeneID:   1064653
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW367
- eggNOG:   COG0629
- HOGENOM:   HBG755544
- OMA:   MTHDARI
- ProtClustDB:   CLSK231596
- BioCyc:   TWHI218496:TW0345-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 16650; Mature: 16650

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGKRMNHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRNANSWVSGDTNWFTVT
CCCCCCCEEEEEEEEEECCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
GFRALGSNAAESISKGDRVIVYGRLRLRTWGDNKMAVEIEAESFGHDLRWGTSVFSKRFY
EEHHHCCCHHHHHCCCCEEEEEEEEEEEEECCCEEEEEEEHHHCCCCCCCHHHHHHHHHH
QLPEASDNLRTKYDVDEAETPEIHAKAA
CCCCCCCCCCEEECCCCCCCCCEEEECC
>Mature Secondary Structure
MRGKRMNHITVSGLVATEPRSFLTAEGVHITSFRLAAQDRHFSRNANSWVSGDTNWFTVT
CCCCCCCEEEEEEEEEECCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEE
GFRALGSNAAESISKGDRVIVYGRLRLRTWGDNKMAVEIEAESFGHDLRWGTSVFSKRFY
EEHHHCCCHHHHHCCCCEEEEEEEEEEEEECCCEEEEEEEHHHCCCCCCCHHHHHHHHHH
QLPEASDNLRTKYDVDEAETPEIHAKAA
CCCCCCCCCCEEECCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12606174