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The map label for this gene is yhiH [C]

Identifier: 28572514

GI number: 28572514

Start: 394242

End: 395789

Strand: Direct

Name: yhiH [C]

Synonym: TW361

Alternate gene names: 28572514

Gene position: 394242-395789 (Clockwise)

Preceding gene: 28572513

Following gene: 28572515

Centisome position: 42.58

GC content: 43.48

Gene sequence:

>1548_bases
ATGAGTAATCCGAATATTGTAGCTACACAATCCGCGATACGCGAGGATGTTGAGATCAGCAACTGGTCTTTTTCTCATTC
GGGTGATACGATCATCAATAATCTCTCTCTCAGTATCAGGCAGGGTGAACGTGTTCTTATAATCGGGCCATCAGGTTGTG
GTAAATCCACTTTACTGTTAGCCCTTGCAGGGCTTGTACACGGATTCCGGGGCAGTATTCTGATTGGAGGTGAACAACCC
GCTCCTGACCAAACTGCTTTTGTTATGCAAGACCCTGATAGTCAGGTTATTTTTCCAAATATTGGTGATGAAGTTGCATT
TCCGCTAGAACTTACAATGCCCAATAGGCGAGATATTTGGGAAGCAGTTAGCATGGGCTTAAAAAGCGTTGGTCTTAGCC
TCCCGACCACAACCCAAAGTGACAAGTTATCACACGGCCAAAAGCAATGTCTTAGCATAGCGTGCACTTTCGCGTCCTGC
CCAAAGATTCTGCTTTTGGATGAGCCACTTGCAAGCCTTGATAAAAACAGTACCGAGCAAGTGCTCAAGTGCTTCGATAG
TCTATTTGATGTCATGGGTAGCAGTTTCGCTTACACAACGTTTATAACCGGCCATGACGTTGAACCTTGGATAAATCGCG
TAGACAGAGTAGTTGTGTTTAATTCAAAAGGCTCACTCAGCTACGACCTTCCCGTGGGCGCAATAAAAAATAATAAAGCT
ATCCTACAGAAAGCAGGAGTTTTTTATAAACACAGAACCCTGGGTAATAGGTCAGGCCCACGTACACTGCATGATTCCAA
CCGACCTGTAATTATGGAAGTTACAAATCTTGCTGTTACACGTGGTAAGAATAATCTCTTTGAGAATGTGACTTTCCAAG
TGCATTCCGGAGAATGCATAGCGATAATAGGACCTAATGGCGTCGGTAAAACCAGTATTTTACTTACTGTCTCGGGGCTA
ATGCGCGCCAAGCGCGGTGACATATTCTTTGAATGCTGTATGCATGACTCGCGTGGTAGATGTCAATATTCCTGCGGCAT
GAATAGAGATATTCTCACACATACATCACCCTGTGGCAGTTTTCGAAATATGCATCCCCCTGCGCGCTGCATAAAAAAAC
CAAGACATATGGCACGCAATCTTAGAAAACATACTGCAATTGTTATGCAAAATCCGGAGCATCAATTTTTGGCATCCTCA
GTCGATAGGGAATTAGCCCTCGGTAAGGGTAATTGTTTCGGAAATGATGATTTGTTAGAAAGACTTAATCTTCTTGATGC
AAAATCATTAAACCCTTTCACTTTGTCATGGGGGCAGAAACGCCGTCTTGCTCTTGCAATCTCTGTCTCCATGAGGCCAA
GGATTCTTTTACTCGATGAGCCACTTGTTGGTCAAGATGCTGATATCTCTGATCAGATAGTTGATTTTCTTATTGATTTG
AAGCTCAAGGGTCTTGGAATCCTTATTGCAACACACAGTAAGCCATTAATTGATGCTCTTGCTGACAGAGTTATGGAACT
CAAAGCGGGGGAGATTGCATGGAAATAA

Upstream 100 bases:

>100_bases
GGCGCTCTGGACCCTCTTGATACTTTCAAGTAAGTAGGGTTTTGGATTTGCCAGTTTCTTCTTTTACCAACGAATCATAC
TGCGAGAATAACTGGGTTCT

Downstream 100 bases:

>100_bases
GGCTGCCCTATATTTCCTCTATTTATGTAAATCCTTTAACTCGTCTTCTGGCCGGTATCTCCGTGACTGTATTTTTGCTT
TTGAGCCTAAACCCATACCG

Product: ABC transporter ATP-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MSNPNIVATQSAIREDVEISNWSFSHSGDTIINNLSLSIRQGERVLIIGPSGCGKSTLLLALAGLVHGFRGSILIGGEQP
APDQTAFVMQDPDSQVIFPNIGDEVAFPLELTMPNRRDIWEAVSMGLKSVGLSLPTTTQSDKLSHGQKQCLSIACTFASC
PKILLLDEPLASLDKNSTEQVLKCFDSLFDVMGSSFAYTTFITGHDVEPWINRVDRVVVFNSKGSLSYDLPVGAIKNNKA
ILQKAGVFYKHRTLGNRSGPRTLHDSNRPVIMEVTNLAVTRGKNNLFENVTFQVHSGECIAIIGPNGVGKTSILLTVSGL
MRAKRGDIFFECCMHDSRGRCQYSCGMNRDILTHTSPCGSFRNMHPPARCIKKPRHMARNLRKHTAIVMQNPEHQFLASS
VDRELALGKGNCFGNDDLLERLNLLDAKSLNPFTLSWGQKRRLALAISVSMRPRILLLDEPLVGQDADISDQIVDFLIDL
KLKGLGILIATHSKPLIDALADRVMELKAGEIAWK

Sequences:

>Translated_515_residues
MSNPNIVATQSAIREDVEISNWSFSHSGDTIINNLSLSIRQGERVLIIGPSGCGKSTLLLALAGLVHGFRGSILIGGEQP
APDQTAFVMQDPDSQVIFPNIGDEVAFPLELTMPNRRDIWEAVSMGLKSVGLSLPTTTQSDKLSHGQKQCLSIACTFASC
PKILLLDEPLASLDKNSTEQVLKCFDSLFDVMGSSFAYTTFITGHDVEPWINRVDRVVVFNSKGSLSYDLPVGAIKNNKA
ILQKAGVFYKHRTLGNRSGPRTLHDSNRPVIMEVTNLAVTRGKNNLFENVTFQVHSGECIAIIGPNGVGKTSILLTVSGL
MRAKRGDIFFECCMHDSRGRCQYSCGMNRDILTHTSPCGSFRNMHPPARCIKKPRHMARNLRKHTAIVMQNPEHQFLASS
VDRELALGKGNCFGNDDLLERLNLLDAKSLNPFTLSWGQKRRLALAISVSMRPRILLLDEPLVGQDADISDQIVDFLIDL
KLKGLGILIATHSKPLIDALADRVMELKAGEIAWK
>Mature_514_residues
SNPNIVATQSAIREDVEISNWSFSHSGDTIINNLSLSIRQGERVLIIGPSGCGKSTLLLALAGLVHGFRGSILIGGEQPA
PDQTAFVMQDPDSQVIFPNIGDEVAFPLELTMPNRRDIWEAVSMGLKSVGLSLPTTTQSDKLSHGQKQCLSIACTFASCP
KILLLDEPLASLDKNSTEQVLKCFDSLFDVMGSSFAYTTFITGHDVEPWINRVDRVVVFNSKGSLSYDLPVGAIKNNKAI
LQKAGVFYKHRTLGNRSGPRTLHDSNRPVIMEVTNLAVTRGKNNLFENVTFQVHSGECIAIIGPNGVGKTSILLTVSGLM
RAKRGDIFFECCMHDSRGRCQYSCGMNRDILTHTSPCGSFRNMHPPARCIKKPRHMARNLRKHTAIVMQNPEHQFLASSV
DRELALGKGNCFGNDDLLERLNLLDAKSLNPFTLSWGQKRRLALAISVSMRPRILLLDEPLVGQDADISDQIVDFLIDLK
LKGLGILIATHSKPLIDALADRVMELKAGEIAWK

Specific function: Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system [H]

COG id: COG1122

COG function: function code P; ABC-type cobalt transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI4557481, Length=282, Percent_Identity=28.0141843971631, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI21536378, Length=171, Percent_Identity=32.1637426900585, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=30.9178743961353, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI87081709, Length=216, Percent_Identity=32.4074074074074, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1787370, Length=197, Percent_Identity=32.48730964467, Blast_Score=94, Evalue=3e-20,
Organism=Escherichia coli, GI48995001, Length=498, Percent_Identity=22.6907630522088, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1788761, Length=227, Percent_Identity=30.8370044052863, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI87081791, Length=219, Percent_Identity=31.9634703196347, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787712, Length=222, Percent_Identity=31.0810810810811, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790467, Length=213, Percent_Identity=29.1079812206573, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1787029, Length=247, Percent_Identity=31.1740890688259, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787792, Length=518, Percent_Identity=22.007722007722, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788225, Length=257, Percent_Identity=25.2918287937743, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1786398, Length=227, Percent_Identity=30.3964757709251, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87082267, Length=216, Percent_Identity=28.7037037037037, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787089, Length=239, Percent_Identity=26.7782426778243, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1787164, Length=212, Percent_Identity=31.6037735849057, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1789672, Length=259, Percent_Identity=24.7104247104247, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1787758, Length=200, Percent_Identity=30.5, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788472, Length=324, Percent_Identity=23.7654320987654, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081834, Length=189, Percent_Identity=28.042328042328, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786698, Length=212, Percent_Identity=29.2452830188679, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787547, Length=196, Percent_Identity=31.1224489795918, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787500, Length=206, Percent_Identity=30.5825242718447, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1789032, Length=222, Percent_Identity=29.2792792792793, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789586, Length=229, Percent_Identity=26.2008733624454, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790162, Length=212, Percent_Identity=29.7169811320755, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789873, Length=204, Percent_Identity=27.9411764705882, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1788506, Length=256, Percent_Identity=25.390625, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789891, Length=211, Percent_Identity=30.8056872037915, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1786654, Length=186, Percent_Identity=30.1075268817204, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1786703, Length=200, Percent_Identity=28, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787113, Length=199, Percent_Identity=29.1457286432161, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=28.8461538461538, Blast_Score=62, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=235, Percent_Identity=28.0851063829787, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17542146, Length=152, Percent_Identity=32.8947368421053, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=171, Percent_Identity=30.4093567251462, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17569081, Length=181, Percent_Identity=29.2817679558011, Blast_Score=65, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324314, Length=331, Percent_Identity=24.773413897281, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24662800, Length=158, Percent_Identity=30.379746835443, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574744, Length=173, Percent_Identity=30.635838150289, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574533, Length=258, Percent_Identity=23.6434108527132, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI161076684, Length=189, Percent_Identity=29.1005291005291, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581617, Length=189, Percent_Identity=29.1005291005291, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581615, Length=189, Percent_Identity=29.1005291005291, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI161076682, Length=189, Percent_Identity=29.1005291005291, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 56569; Mature: 56438

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPNIVATQSAIREDVEISNWSFSHSGDTIINNLSLSIRQGERVLIIGPSGCGKSTLLL
CCCCCEEEEHHHHHCCCCCCCEEECCCCCEEEEEEEEEEECCCEEEEECCCCCCHHHHHH
ALAGLVHGFRGSILIGGEQPAPDQTAFVMQDPDSQVIFPNIGDEVAFPLELTMPNRRDIW
HHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEEECCCHHHHH
EAVSMGLKSVGLSLPTTTQSDKLSHGQKQCLSIACTFASCPKILLLDEPLASLDKNSTEQ
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCEEEEECCCHHHCCCCCHHH
VLKCFDSLFDVMGSSFAYTTFITGHDVEPWINRVDRVVVFNSKGSLSYDLPVGAIKNNKA
HHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCEEEEECCCCCEEECCCCCEECCCHH
ILQKAGVFYKHRTLGNRSGPRTLHDSNRPVIMEVTNLAVTRGKNNLFENVTFQVHSGECI
HHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCEE
AIIGPNGVGKTSILLTVSGLMRAKRGDIFFECCMHDSRGRCQYSCGMNRDILTHTSPCGS
EEECCCCCCCEEEEEEEHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCEECCCCCCC
FRNMHPPARCIKKPRHMARNLRKHTAIVMQNPEHQFLASSVDRELALGKGNCFGNDDLLE
CCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCHHHCCCCCCCCCCHHHHH
RLNLLDAKSLNPFTLSWGQKRRLALAISVSMRPRILLLDEPLVGQDADISDQIVDFLIDL
HHHHHCCCCCCCEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHE
KLKGLGILIATHSKPLIDALADRVMELKAGEIAWK
EECCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SNPNIVATQSAIREDVEISNWSFSHSGDTIINNLSLSIRQGERVLIIGPSGCGKSTLLL
CCCCEEEEHHHHHCCCCCCCEEECCCCCEEEEEEEEEEECCCEEEEECCCCCCHHHHHH
ALAGLVHGFRGSILIGGEQPAPDQTAFVMQDPDSQVIFPNIGDEVAFPLELTMPNRRDIW
HHHHHHHCCCCCEEECCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEEECCCHHHHH
EAVSMGLKSVGLSLPTTTQSDKLSHGQKQCLSIACTFASCPKILLLDEPLASLDKNSTEQ
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEHHHCCCEEEEECCCHHHCCCCCHHH
VLKCFDSLFDVMGSSFAYTTFITGHDVEPWINRVDRVVVFNSKGSLSYDLPVGAIKNNKA
HHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHCCCEEEEECCCCCEEECCCCCEECCCHH
ILQKAGVFYKHRTLGNRSGPRTLHDSNRPVIMEVTNLAVTRGKNNLFENVTFQVHSGECI
HHHHCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCEE
AIIGPNGVGKTSILLTVSGLMRAKRGDIFFECCMHDSRGRCQYSCGMNRDILTHTSPCGS
EEECCCCCCCEEEEEEEHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCCCEECCCCCCC
FRNMHPPARCIKKPRHMARNLRKHTAIVMQNPEHQFLASSVDRELALGKGNCFGNDDLLE
CCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHCCHHHCCCCCCCCCCHHHHH
RLNLLDAKSLNPFTLSWGQKRRLALAISVSMRPRILLLDEPLVGQDADISDQIVDFLIDL
HHHHHCCCCCCCEEECCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHE
KLKGLGILIATHSKPLIDALADRVMELKAGEIAWK
EECCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]