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The map label for this gene is 28572515

Identifier: 28572515

GI number: 28572515

Start: 395780

End: 396508

Strand: Direct

Name: 28572515

Synonym: TW362

Alternate gene names: NA

Gene position: 395780-396508 (Clockwise)

Preceding gene: 28572514

Following gene: 28572517

Centisome position: 42.74

GC content: 41.7

Gene sequence:

>729_bases
ATGGAAATAAGGCTGCCCTATATTTCCTCTATTTATGTAAATCCTTTAACTCGTCTTCTGGCCGGTATCTCCGTGACTGT
ATTTTTGCTTTTGAGCCTAAACCCATACCGATCTGCAATTTGTGCGATTTTACTATTAGTTTTGTCTGGACTTGATAAAC
AATGTCTGTATTTTTTGTTATCGGTCACGCTGGTATCGGGTCTTACCTTTATAAGTGCTTTATTGTATGCAAAACCGACA
GGTTTGACATATGCAAAGTTCAGTGTGTTTGATGCAACAATAGTGCAAATTACCGACGGATCTCTTTACTTGTCTACTTC
TCTTTTTGCCAGGATGATTGCATTTGGCGTTATTTCACTTCTTGTTTTTTACCGTATCAATTTCACGGCTCTGGCTGATG
GGTTTGTGCAGTTATTACGTGTTCCGCGAAAATTGGTATTTTCTACACTCTCTGGGCTTAGAACTTGTCTTCTAATCGGA
CGGGATTGCAGGAATATACGCTACATGTGCGCCCTTAGAGGGGTATCTTTTTTTTCGAGAGGTGTTATGCCGCTTTTTGT
ATCAGCAATGAGAAGGGCGTACTGGCTTTCAATCGTACTTAAACTTAGGGGTATTGAGGCTCTAGCAAAGACGCACGCCC
GATCAGCACATCTCGGTGTCAATGATCTGATGTTTTTCTGCGCATGTATCGCAATCATGGTTGTTTCACACAGCGTGTCC
GTAGGTTAG

Upstream 100 bases:

>100_bases
TGAAGCTCAAGGGTCTTGGAATCCTTATTGCAACACACAGTAAGCCATTAATTGATGCTCTTGCTGACAGAGTTATGGAA
CTCAAAGCGGGGGAGATTGC

Downstream 100 bases:

>100_bases
CATGCAAGGCCCCTGATTCGATTATCGGATCTAGGCAGCCGATACACAACCAAGCGCCCCCGACAGGAATCGAACCTGCG
ACACAAAGATTAGAAGTCTT

Product: ABC transporter integral membrane subunit

Products: NA

Alternate protein names: ABC Transporter Permease; ABC-Type Transporter Permease Components; ABC Transporter Integral Membrane Subunit; Cobalt ABC Transporter Permease; ABC Transporter; ABC-Type Cobalt Transport System Permease Component CbiQ

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MEIRLPYISSIYVNPLTRLLAGISVTVFLLLSLNPYRSAICAILLLVLSGLDKQCLYFLLSVTLVSGLTFISALLYAKPT
GLTYAKFSVFDATIVQITDGSLYLSTSLFARMIAFGVISLLVFYRINFTALADGFVQLLRVPRKLVFSTLSGLRTCLLIG
RDCRNIRYMCALRGVSFFSRGVMPLFVSAMRRAYWLSIVLKLRGIEALAKTHARSAHLGVNDLMFFCACIAIMVVSHSVS
VG

Sequences:

>Translated_242_residues
MEIRLPYISSIYVNPLTRLLAGISVTVFLLLSLNPYRSAICAILLLVLSGLDKQCLYFLLSVTLVSGLTFISALLYAKPT
GLTYAKFSVFDATIVQITDGSLYLSTSLFARMIAFGVISLLVFYRINFTALADGFVQLLRVPRKLVFSTLSGLRTCLLIG
RDCRNIRYMCALRGVSFFSRGVMPLFVSAMRRAYWLSIVLKLRGIEALAKTHARSAHLGVNDLMFFCACIAIMVVSHSVS
VG
>Mature_242_residues
MEIRLPYISSIYVNPLTRLLAGISVTVFLLLSLNPYRSAICAILLLVLSGLDKQCLYFLLSVTLVSGLTFISALLYAKPT
GLTYAKFSVFDATIVQITDGSLYLSTSLFARMIAFGVISLLVFYRINFTALADGFVQLLRVPRKLVFSTLSGLRTCLLIG
RDCRNIRYMCALRGVSFFSRGVMPLFVSAMRRAYWLSIVLKLRGIEALAKTHARSAHLGVNDLMFFCACIAIMVVSHSVS
VG

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26749; Mature: 26749

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIRLPYISSIYVNPLTRLLAGISVTVFLLLSLNPYRSAICAILLLVLSGLDKQCLYFLL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
SVTLVSGLTFISALLYAKPTGLTYAKFSVFDATIVQITDGSLYLSTSLFARMIAFGVISL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LVFYRINFTALADGFVQLLRVPRKLVFSTLSGLRTCLLIGRDCRNIRYMCALRGVSFFSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GVMPLFVSAMRRAYWLSIVLKLRGIEALAKTHARSAHLGVNDLMFFCACIAIMVVSHSVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
VG
CC
>Mature Secondary Structure
MEIRLPYISSIYVNPLTRLLAGISVTVFLLLSLNPYRSAICAILLLVLSGLDKQCLYFLL
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
SVTLVSGLTFISALLYAKPTGLTYAKFSVFDATIVQITDGSLYLSTSLFARMIAFGVISL
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LVFYRINFTALADGFVQLLRVPRKLVFSTLSGLRTCLLIGRDCRNIRYMCALRGVSFFSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GVMPLFVSAMRRAYWLSIVLKLRGIEALAKTHARSAHLGVNDLMFFCACIAIMVVSHSVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
VG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA