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The map label for this gene is atpF

Identifier: 28572494

GI number: 28572494

Start: 370894

End: 371412

Strand: Direct

Name: atpF

Synonym: TW340

Alternate gene names: 28572494

Gene position: 370894-371412 (Clockwise)

Preceding gene: 28572493

Following gene: 28572495

Centisome position: 40.06

GC content: 50.29

Gene sequence:

>519_bases
ATGAAGTTTGCACAACCCCACAATCCGCTGCTGCCTAGTGTTCCGGATATTGTATTCTCGGCCATTGTTCTGGCTATTGT
TTTACCATTTTTTTGGTGGTTTGTTATTCCGAGAATTAGTAAGCTTCTGAGTGATCGATCCTCCCTGATAGAGGGAAAGA
TTTCGGAGGCTGCCTCTGCGCATGCCCGCGCGCTCGAGACCCTTGAGCTCAGAAAACAGCAGCTAGATGAGGCAAAATCC
GAGGCTTCGCAAATTAGGCAAGAGGCGCGGGATGATGCCCAGCTGATACTACAACAAGCCCGAGAGACAGCCGATGAAAC
AGCTGAGCGTGTCATGCTTCACGCGAGGGAGCAAATTCAAGCCGAGAAGGCTGCAGCTCTTCTTTCTTTGCGTTCGGAGA
TTGCAACCTTGGCTCTCGCCGCAGCAGGTAAGGCTGTTTCCGAGAAACTTGATGACGATAAAAAGTCTCGTGAATTGGTT
AGTGCATCTATCGCAAAGATGGCTGAAGATGCCGGGTAG

Upstream 100 bases:

>100_bases
CGTTTTGATGTATGTTGGTGTTGCATTTACTGAGGCTTTGGCTCTAATAGGTATTGGGACTTACTTTCTGTTCAGGTAGC
TCTCCGAAAGTTGTAGGTAT

Downstream 100 bases:

>100_bases
CTCGTCCAGGTCATCTCTCGCGCATTTGCGCAATCGACTCAGTGAGTGCAGCGATTTACAGAGCTTATATGAAGTGGCAG
TTCTATTGGCGATTTCTCGG

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKFAQPHNPLLPSVPDIVFSAIVLAIVLPFFWWFVIPRISKLLSDRSSLIEGKISEAASAHARALETLELRKQQLDEAKS
EASQIRQEARDDAQLILQQARETADETAERVMLHAREQIQAEKAAALLSLRSEIATLALAAAGKAVSEKLDDDKKSRELV
SASIAKMAEDAG

Sequences:

>Translated_172_residues
MKFAQPHNPLLPSVPDIVFSAIVLAIVLPFFWWFVIPRISKLLSDRSSLIEGKISEAASAHARALETLELRKQQLDEAKS
EASQIRQEARDDAQLILQQARETADETAERVMLHAREQIQAEKAAALLSLRSEIATLALAAAGKAVSEKLDDDKKSRELV
SASIAKMAEDAG
>Mature_172_residues
MKFAQPHNPLLPSVPDIVFSAIVLAIVLPFFWWFVIPRISKLLSDRSSLIEGKISEAASAHARALETLELRKQQLDEAKS
EASQIRQEARDDAQLILQQARETADETAERVMLHAREQIQAEKAAALLSLRSEIATLALAAAGKAVSEKLDDDKKSRELV
SASIAKMAEDAG

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_TROW8 (Q83HY4)

Other databases:

- EMBL:   BX251411
- RefSeq:   NP_789274.1
- STRING:   Q83HY4
- GeneID:   1064627
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW340
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- OMA:   LEEYKQQ
- ProtClustDB:   PRK05759
- BioCyc:   TWHI218496:TW0319-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 18883; Mature: 18883

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbf03ff0)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAQPHNPLLPSVPDIVFSAIVLAIVLPFFWWFVIPRISKLLSDRSSLIEGKISEAASA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARALETLELRKQQLDEAKSEASQIRQEARDDAQLILQQARETADETAERVMLHAREQIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKAAALLSLRSEIATLALAAAGKAVSEKLDDDKKSRELVSASIAKMAEDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKFAQPHNPLLPSVPDIVFSAIVLAIVLPFFWWFVIPRISKLLSDRSSLIEGKISEAASA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HARALETLELRKQQLDEAKSEASQIRQEARDDAQLILQQARETADETAERVMLHAREQIQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEKAAALLSLRSEIATLALAAAGKAVSEKLDDDKKSRELVSASIAKMAEDAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12606174