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The map label for this gene is atpH

Identifier: 28572495

GI number: 28572495

Start: 371402

End: 372190

Strand: Direct

Name: atpH

Synonym: TW341

Alternate gene names: 28572495

Gene position: 371402-372190 (Clockwise)

Preceding gene: 28572494

Following gene: 28572496

Centisome position: 40.11

GC content: 43.98

Gene sequence:

>789_bases
ATGCCGGGTAGCTCGTCCAGGTCATCTCTCGCGCATTTGCGCAATCGACTCAGTGAGTGCAGCGATTTACAGAGCTTATA
TGAAGTGGCAGTTCTATTGGCGATTTCTCGGCGCCTTCGCTCATCTCTTGTATCCCGATCTCTTAGTTGTGTCTCAAAAC
AAAAGCTTATTGCGGAACTTACTGGAAAGGATCCGGATGCCTTTATCTGTATGGCAGTTAGCCTTCGCTGGTCGGAGCCA
ATTGATCTTCTGTATGCCTTTGAGGAGATGTTTATAAGAGCGTCTTGCACGCGTCGATTTGCAGATTGTCGGGATTTTTT
AGATGAGCTTTTCTGGGTGTCAAGCATTGTTGATTCGCATAAGATTCTTGATAAGACTCTAAGCGCGCGTTTTCTGCCCG
CATATTCGAAGAAACAATTGATTTCCGGCGTGTTTGCCGGAGCTCACGAAGGCACTTTGGCTGTTCTTGAATATTTTGCA
TGCTATATGCAAAAGAAAAGAGCGTTTCGTGAATGTGTTTTTTTTGCAGAGAAAATAGTTGCTGATGAGCTTGGTGCACA
AATAGCAGATGTAACAACCGAAAGGCCATTATCGCGGGAGCAGAGGGATGAGTTAGTTGATGTGCTTTCTAGGCGTTTCA
AAAGAAGAATTATTTTGCGCGAGGTTATTAATGAAAAAGTCTTCGGAGGTGTCAGGGTTCAGGTGAATCATTCAGTGATA
GATGATACTGTCGCTGTTCATCTGAATAACTTGGCTCTTTCTTTTGGTGCACTTGAAACTTTTAGCTGA

Upstream 100 bases:

>100_bases
TTGGCTCTCGCCGCAGCAGGTAAGGCTGTTTCCGAGAAACTTGATGACGATAAAAAGTCTCGTGAATTGGTTAGTGCATC
TATCGCAAAGATGGCTGAAG

Downstream 100 bases:

>100_bases
AAAGGGGGATATGTCTAAACAACCGATAATCACTTCTGAGGAAGTAAGGGGGGTTATCCGCAATCTCCTGGATTCAACTC
TTTCTGCAGCGAGAGAGGCA

Product: ATP synthase delta chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MPGSSSRSSLAHLRNRLSECSDLQSLYEVAVLLAISRRLRSSLVSRSLSCVSKQKLIAELTGKDPDAFICMAVSLRWSEP
IDLLYAFEEMFIRASCTRRFADCRDFLDELFWVSSIVDSHKILDKTLSARFLPAYSKKQLISGVFAGAHEGTLAVLEYFA
CYMQKKRAFRECVFFAEKIVADELGAQIADVTTERPLSREQRDELVDVLSRRFKRRIILREVINEKVFGGVRVQVNHSVI
DDTVAVHLNNLALSFGALETFS

Sequences:

>Translated_262_residues
MPGSSSRSSLAHLRNRLSECSDLQSLYEVAVLLAISRRLRSSLVSRSLSCVSKQKLIAELTGKDPDAFICMAVSLRWSEP
IDLLYAFEEMFIRASCTRRFADCRDFLDELFWVSSIVDSHKILDKTLSARFLPAYSKKQLISGVFAGAHEGTLAVLEYFA
CYMQKKRAFRECVFFAEKIVADELGAQIADVTTERPLSREQRDELVDVLSRRFKRRIILREVINEKVFGGVRVQVNHSVI
DDTVAVHLNNLALSFGALETFS
>Mature_261_residues
PGSSSRSSLAHLRNRLSECSDLQSLYEVAVLLAISRRLRSSLVSRSLSCVSKQKLIAELTGKDPDAFICMAVSLRWSEPI
DLLYAFEEMFIRASCTRRFADCRDFLDELFWVSSIVDSHKILDKTLSARFLPAYSKKQLISGVFAGAHEGTLAVLEYFAC
YMQKKRAFRECVFFAEKIVADELGAQIADVTTERPLSREQRDELVDVLSRRFKRRIILREVINEKVFGGVRVQVNHSVID
DTVAVHLNNLALSFGALETFS

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_TROW8 (Q83HY3)

Other databases:

- EMBL:   BX251411
- RefSeq:   NP_789275.1
- STRING:   Q83HY3
- GeneID:   1064628
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW341
- eggNOG:   NOG151056
- HOGENOM:   HBG251182
- ProtClustDB:   CLSK229668
- BioCyc:   TWHI218496:TW0320-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- PANTHER:   PTHR11910

Pfam domain/function: PF00213 OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 29653; Mature: 29521

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGSSSRSSLAHLRNRLSECSDLQSLYEVAVLLAISRRLRSSLVSRSLSCVSKQKLIAEL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGKDPDAFICMAVSLRWSEPIDLLYAFEEMFIRASCTRRFADCRDFLDELFWVSSIVDSH
CCCCCCCEEEHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILDKTLSARFLPAYSKKQLISGVFAGAHEGTLAVLEYFACYMQKKRAFRECVFFAEKIV
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADELGAQIADVTTERPLSREQRDELVDVLSRRFKRRIILREVINEKVFGGVRVQVNHSVI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHH
DDTVAVHLNNLALSFGALETFS
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PGSSSRSSLAHLRNRLSECSDLQSLYEVAVLLAISRRLRSSLVSRSLSCVSKQKLIAEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGKDPDAFICMAVSLRWSEPIDLLYAFEEMFIRASCTRRFADCRDFLDELFWVSSIVDSH
CCCCCCCEEEHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILDKTLSARFLPAYSKKQLISGVFAGAHEGTLAVLEYFACYMQKKRAFRECVFFAEKIV
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADELGAQIADVTTERPLSREQRDELVDVLSRRFKRRIILREVINEKVFGGVRVQVNHSVI
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHH
DDTVAVHLNNLALSFGALETFS
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12606174