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The map label for this gene is 28572467

Identifier: 28572467

GI number: 28572467

Start: 345350

End: 345712

Strand: Direct

Name: 28572467

Synonym: TW312

Alternate gene names: NA

Gene position: 345350-345712 (Clockwise)

Preceding gene: 28572466

Following gene: 28572468

Centisome position: 37.3

GC content: 41.6

Gene sequence:

>363_bases
GTGACTCATGACGTCTCAAAATATGCCCTGGGCCGAATTGCGGAAGATAAGGCGTGCAACTATCTTTCTGTAAATGGCTA
TATTGTGCTTGATCGTAATTGGTATTGCAGATTTGGCGAGCTGGATATCATTGCCAGGAAAAATGGGGTAATAGTTGCTG
TTGAGGTAAAGGGTGGTAAACGCAACGCGGACTACCCAATCTGCAATATAACTGTCAAAAAGCTGTCGAAACTGACATTT
CTTCTGAAAGCATGGCTTCACGAGAATAAATTAAACGAATTTTGCATTGATCTCAGAATAGACGCCGTCTCGGTTACATT
TATTCCGGAATTGCAGATCCGTCATTTTGTTGGAATTTTGTGA

Upstream 100 bases:

>100_bases
TGTCAATTGTGTAAATACAGTTTCTGCATCTACACGCCACCAGTTGACTTGTGTCAACAACGGCTTTTGTACAAGAGCTT
TGCGCAGCAATGCACACGGC

Downstream 100 bases:

>100_bases
TTGCAAAAACTTACTCCGTTGCACTAAATGGCCTTCAGAGCAGCATGGTTGAACTTGAAGCGGATATAGGTAACGGCCTT
CCAATTTTTACACTTGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MTHDVSKYALGRIAEDKACNYLSVNGYIVLDRNWYCRFGELDIIARKNGVIVAVEVKGGKRNADYPICNITVKKLSKLTF
LLKAWLHENKLNEFCIDLRIDAVSVTFIPELQIRHFVGIL

Sequences:

>Translated_120_residues
MTHDVSKYALGRIAEDKACNYLSVNGYIVLDRNWYCRFGELDIIARKNGVIVAVEVKGGKRNADYPICNITVKKLSKLTF
LLKAWLHENKLNEFCIDLRIDAVSVTFIPELQIRHFVGIL
>Mature_119_residues
THDVSKYALGRIAEDKACNYLSVNGYIVLDRNWYCRFGELDIIARKNGVIVAVEVKGGKRNADYPICNITVKKLSKLTFL
LKAWLHENKLNEFCIDLRIDAVSVTFIPELQIRHFVGIL

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y312_TROW8 (Q83I01)

Other databases:

- EMBL:   BX251411
- RefSeq:   NP_789247.1
- STRING:   Q83I01
- GeneID:   1064600
- GenomeReviews:   BX072543_GR
- KEGG:   tws:TW312
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   YPICNIT
- ProtClustDB:   PRK12497
- BioCyc:   TWHI218496:TW0292-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13728; Mature: 13597

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHDVSKYALGRIAEDKACNYLSVNGYIVLDRNWYCRFGELDIIARKNGVIVAVEVKGGK
CCCCCCHHHHCCCCCCCCCCEEECCCEEEECCCEEEEECCEEEEEECCCEEEEEEECCCC
RNADYPICNITVKKLSKLTFLLKAWLHENKLNEFCIDLRIDAVSVTFIPELQIRHFVGIL
CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCHHHHHCCCC
>Mature Secondary Structure 
THDVSKYALGRIAEDKACNYLSVNGYIVLDRNWYCRFGELDIIARKNGVIVAVEVKGGK
CCCCCHHHHCCCCCCCCCCEEECCCEEEECCCEEEEECCEEEEEECCCEEEEEEECCCC
RNADYPICNITVKKLSKLTFLLKAWLHENKLNEFCIDLRIDAVSVTFIPELQIRHFVGIL
CCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12606174