| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is ogt [H]
Identifier: 28572456
GI number: 28572456
Start: 337674
End: 338228
Strand: Reverse
Name: ogt [H]
Synonym: TW300
Alternate gene names: 28572456
Gene position: 338228-337674 (Counterclockwise)
Preceding gene: 28572457
Following gene: 28572442
Centisome position: 36.53
GC content: 41.8
Gene sequence:
>555_bases ATGTCTTCAGTGGAATTTGCAGTACGCATGAGAGCCTGTGCTTTTAGGGTAAAGGTTTATTCTTCGCAAACACATATCAT TAGGGTAAAAATCTTTCGGTATGCAAGTGTGATAGATGATGCACATAAAAATACGAGATATAAAACCAGGTCGCTTTCGG AGGGTTCATGTGATTGTCATGCGAGCAATAAGAACTCATCTTTGACCACAGATTTAACCGCAGAGGCAAGGCGGGAAATC CTCGCATATTTCTCAGGAACTCTAAAGACATTTTCGGTGCCCATAAGCCTGGAAAAGGCATCTGCAAAACAGGCAGATGT TCTCAATATGCTTTTAAAAATTCCATACGGTGGATGTGTAAGCTACGGTGAGATAGCATCAAAAGTAAACTCCTCACCAA GGGCTGTTGGTGCTTATTGCGCAAAGAATCCCCTGCCGTTTTTTGTACCGTGTCACAGGGTTATACGGTCAAATGGTGAG GTGGGAGGGTATTGTGGGTCTTCAAATAATTTGATAAAGCACTCACTGATCGAAATTGAACAGAAAAACTCATAA
Upstream 100 bases:
>100_bases CAATCTGTGAAAGCTAAGATGGTTGAAATACCCGAGCGCGTACGGAAACTCATAAACGAAATCGAGATGCAGGAAACGTC CTTTAGGCAAGCAGTCTAGT
Downstream 100 bases:
>100_bases AAGATAACTCAGTGGCACTAATAACACTCTGGGTCGTAATGGGCATAGCGGTAATGAGCATATCTGTATTCAATAACAGA TGCAATTGATTACAGATATC
Product: DNA-binding/repair enzyme
Products: NA
Alternate protein names: 6-O-methylguanine-DNA methyltransferase; MGMT; O-6-methylguanine-DNA-alkyltransferase [H]
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSSVEFAVRMRACAFRVKVYSSQTHIIRVKIFRYASVIDDAHKNTRYKTRSLSEGSCDCHASNKNSSLTTDLTAEARREI LAYFSGTLKTFSVPISLEKASAKQADVLNMLLKIPYGGCVSYGEIASKVNSSPRAVGAYCAKNPLPFFVPCHRVIRSNGE VGGYCGSSNNLIKHSLIEIEQKNS
Sequences:
>Translated_184_residues MSSVEFAVRMRACAFRVKVYSSQTHIIRVKIFRYASVIDDAHKNTRYKTRSLSEGSCDCHASNKNSSLTTDLTAEARREI LAYFSGTLKTFSVPISLEKASAKQADVLNMLLKIPYGGCVSYGEIASKVNSSPRAVGAYCAKNPLPFFVPCHRVIRSNGE VGGYCGSSNNLIKHSLIEIEQKNS >Mature_183_residues SSVEFAVRMRACAFRVKVYSSQTHIIRVKIFRYASVIDDAHKNTRYKTRSLSEGSCDCHASNKNSSLTTDLTAEARREIL AYFSGTLKTFSVPISLEKASAKQADVLNMLLKIPYGGCVSYGEIASKVNSSPRAVGAYCAKNPLPFFVPCHRVIRSNGEV GGYCGSSNNLIKHSLIEIEQKNS
Specific function: Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) in DNA. Repairs alkylated guanine in DNA by stoichiometrically transferring the alkyl group at the O-6 position to a cysteine residue in the enzyme. This is a sui
COG id: COG0350
COG function: function code L; Methylated DNA-protein cysteine methyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MGMT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF01035 DNA_binding_1; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 20251; Mature: 20120
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVEFAVRMRACAFRVKVYSSQTHIIRVKIFRYASVIDDAHKNTRYKTRSLSEGSCDCH CCCHHHHHHHHHHHEEEEEECCCCEEEEEEHHHHHHHHHHHHCCCCEEECCCCCCCCCEE ASNKNSSLTTDLTAEARREILAYFSGTLKTFSVPISLEKASAKQADVLNMLLKIPYGGCV CCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECEEECCCCCHHHHHHHHHHHCCCCCCC SYGEIASKVNSSPRAVGAYCAKNPLPFFVPCHRVIRSNGEVGGYCGSSNNLIKHSLIEIE CHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHEE QKNS CCCC >Mature Secondary Structure SSVEFAVRMRACAFRVKVYSSQTHIIRVKIFRYASVIDDAHKNTRYKTRSLSEGSCDCH CCHHHHHHHHHHHEEEEEECCCCEEEEEEHHHHHHHHHHHHCCCCEEECCCCCCCCCEE ASNKNSSLTTDLTAEARREILAYFSGTLKTFSVPISLEKASAKQADVLNMLLKIPYGGCV CCCCCCCEEEHHHHHHHHHHHHHHHCCCEEEEECEEECCCCCHHHHHHHHHHHCCCCCCC SYGEIASKVNSSPRAVGAYCAKNPLPFFVPCHRVIRSNGEVGGYCGSSNNLIKHSLIEIE CHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHEE QKNS CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2505068; 2506524; 9384377 [H]